OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection
Chrispin Chaguza, Anne M. Hahn, Mary E. Petrone, et al.
Cell Reports Medicine (2023) Vol. 4, Iss. 2, pp. 100943-100943
Open Access | Times Cited: 74

Showing 26-50 of 74 citing articles:

Comparison of secondary attack rate and viable virus shedding between patients with SARS‐CoV‐2 Delta and Omicron variants: A prospective cohort study
Sung‐Woon Kang, Ji Yeun Kim, Heedo Park, et al.
Journal of Medical Virology (2022) Vol. 95, Iss. 1
Open Access | Times Cited: 17

Successful Treatment of Persistent Symptomatic Coronavirus Disease 19 Infection With Extended-Duration Nirmatrelvir-Ritonavir Among Outpatients With Hematologic Cancer
Catherine Liu, Leah H Yoke, Pooja Bhattacharyya, et al.
Open Forum Infectious Diseases (2023) Vol. 10, Iss. 6
Open Access | Times Cited: 10

Genomic surveillance of SARS-CoV-2 in mainland China after ending the zero-COVID policy, December 2022–January 2023
Pengcheng Liu, Jin Xu
Journal of Infection (2023) Vol. 86, Iss. 4, pp. e84-e86
Open Access | Times Cited: 8

SARS-CoV-2 Viral Clearance and Evolution Varies by Extent of Immunodeficiency
Yijia Li, Manish C. Choudhary, James Regan, et al.
medRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8

SARS-CoV-2 shedding and evolution in immunocompromised hosts during the Omicron period: a multicenter prospective analysis
Zoe Raglow, Diya Surie, James D. Chappell, et al.
medRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8

SARS-CoV-2 mutant spectra as variant of concern nurseries: endless variation?
Brenda Martínez‐González, María Eugenia Soria, Pablo Mínguez, et al.
Frontiers in Microbiology (2024) Vol. 15
Open Access | Times Cited: 3

Publication-ready single nucleotide polymorphism visualisation with snipit
Áine O’Toole, Ammar Aziz, Daniel Maloney
Bioinformatics (2024) Vol. 40, Iss. 8
Open Access | Times Cited: 3

Within-host evolution of SARS-CoV-2: how often are de novo mutations transmitted from symptomatic infections?
Chapin S. Korosec, Lindi M. Wahl, Jane M. Heffernan
Virus Evolution (2024) Vol. 10, Iss. 1
Open Access | Times Cited: 2

Vivaldi: An amplicon-based whole genome sequencing method for the four seasonal human coronaviruses 229E, NL63, OC43 & HKU1, alongside SARS-CoV-2
C. Patrick McClure, Theocharis Tsoleridis, Nadine Holmes, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2

Phylogenetic signatures reveal multilevel selection and fitness costs in SARS-CoV-2
Vinícius Bonetti Franceschi, Erik Volz
Wellcome Open Research (2024) Vol. 9, pp. 85-85
Open Access | Times Cited: 2

Characterisation of the antibody-mediated selective pressure driving intra-host evolution of SARS-CoV-2 in prolonged infection
Michael Schoefbaenker, Theresa Günther, Eva U. Lorentzen, et al.
PLoS Pathogens (2024) Vol. 20, Iss. 10, pp. e1012624-e1012624
Open Access | Times Cited: 2

Immunosuppression as a Hub for SARS-CoV-2 Mutational Drift
Guy Shapira, Tal Patalon, Sivan Gazit, et al.
Viruses (2023) Vol. 15, Iss. 4, pp. 855-855
Open Access | Times Cited: 5

Web Resources for SARS-CoV-2 Genomic Database, Annotation, Analysis and Variant Tracking
Ye‐Xiao Cheng, Chengyang Ji, Hangyu Zhou, et al.
Viruses (2023) Vol. 15, Iss. 5, pp. 1158-1158
Open Access | Times Cited: 5

Challenges and opportunities of molecular epidemiology: using omics to address complex One Health issues in tropical settings
Feven Tigistu‐Sahle, Zelalem Mekuria, Abhay R. Satoskar, et al.
Frontiers in Tropical Diseases (2023) Vol. 4
Open Access | Times Cited: 5

Anti-COVID drug accelerates viral evolution
Sergei L. Kosakovsky Pond, Darren P. Martin
Nature (2023) Vol. 623, Iss. 7987, pp. 486-487
Closed Access | Times Cited: 5

SARS-CoV-2 infection in immunosuppression evolves sub-lineages which independently accumulate neutralization escape mutations
Gila Lustig, Yashica Ganga, Hylton Rodel, et al.
Virus Evolution (2023) Vol. 10, Iss. 1
Open Access | Times Cited: 5

Quasispecies Analysis of SARS-CoV-2 of 15 Different Lineages during the First Year of the Pandemic Prompts Scratching under the Surface of Consensus Genome Sequences
Wahiba Bader, Jérémy Delerce, Sarah Aherfi, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 24, pp. 15658-15658
Open Access | Times Cited: 8

Phylogenetic meta-analysis of chronic SARS-CoV-2 infections in immunocompromised patients shows no evidence of elevated evolutionary rates
Sanni Översti, Emily Gaul, Björn‐Erik Ole Jensen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4

Rapid Emergence and Evolution of SARS-CoV-2 Variants in Advanced HIV Infection
Sung Hee Ko, Pierce Radecki, Frida Belinky, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

Variant-specific humoral immune response to SARS-CoV-2 escape mutants arising in clinically severe, prolonged infection
Theresa Günther, Michael Schöfbänker, Eva U. Lorentzen, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

VIPERA: Viral Intra-Patient Evolution Reporting and Analysis
Miguel Álvarez-Herrera, Jordi Sevilla, Paula Ruiz-Rodríguez, et al.
Virus Evolution (2024) Vol. 10, Iss. 1
Open Access | Times Cited: 1

Microbial Risk Assessment
Antony D. G. Jones
(2024), pp. 779-832
Closed Access | Times Cited: 1

Determinants of SARS-CoV-2 within-host evolutionary rates in persistently infected individuals
Mahan Ghafari, Steven A. Kemp, Matthew Hall, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

Emergence of recombinant SARS-CoV-2 variants in California, 2020-2022
Rahil Ryder, Emily Smith, Deva Borthwick, et al.
(2024)
Open Access | Times Cited: 1

Relaxed selection can speed the evolution of complex adaptations
Jeremy A. Draghi, C. Brandon Ogbunugafor, Luis Zaman, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

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