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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Deciphering cell–cell interactions and communication from gene expression
Erick Armingol, Adam Officer, Olivier Harismendy, et al.
Nature Reviews Genetics (2020) Vol. 22, Iss. 2, pp. 71-88
Open Access | Times Cited: 914

Showing 26-50 of 914 citing articles:

A physical wiring diagram for the human immune system
Jarrod Shilts, Yannik Severin, Francis Galaway, et al.
Nature (2022) Vol. 608, Iss. 7922, pp. 397-404
Open Access | Times Cited: 94
Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information
Zhaoyang Liu, Dongqing Sun, Chenfei Wang
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 94
CellChat for systematic analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Suoqin Jin, Maksim V. Plikus, Qing Nie
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 94
Spatial omics: Navigating to the golden era of cancer research
Yingcheng Wu, Yifei Cheng, Xiangdong Wang, et al.
Clinical and Translational Medicine (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 93
CellChat for systematic analysis of cell–cell communication from single-cell transcriptomics
Suoqin Jin, Maksim V. Plikus, Qing Nie
Nature Protocols (2024)
Closed Access | Times Cited: 89
Computational solutions for spatial transcriptomics
Iivari Kleino, Paulina Frolovaitė, Tomi Suomi, et al.
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 4870-4884
Open Access | Times Cited: 87
Understanding the cellular interactome of non-alcoholic fatty liver disease
Sebastian Wallace, Frank Tacke, Robert F. Schwabe, et al.
JHEP Reports (2022) Vol. 4, Iss. 8, pp. 100524-100524
Open Access | Times Cited: 83
Optophysiology: Illuminating cell physiology with optogenetics
Peng Tan, Lian He, Yun Huang, et al.
Physiological Reviews (2022) Vol. 102, Iss. 3, pp. 1263-1325
Open Access | Times Cited: 82
Delineating the dynamic evolution from preneoplasia to invasive lung adenocarcinoma by integrating single-cell RNA sequencing and spatial transcriptomics
Jianfei Zhu, Yue Fan, Yanlu Xiong, et al.
Experimental & Molecular Medicine (2022) Vol. 54, Iss. 11, pp. 2060-2076
Open Access | Times Cited: 81
Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST
Wei Liu, Xu Liao, Ziye Luo, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 73
Deciphering tissue structure and function using spatial transcriptomics
Benjamin L. Walker, Zixuan Cang, Honglei Ren, et al.
Communications Biology (2022) Vol. 5, Iss. 1
Open Access | Times Cited: 72
Computational Approaches and Challenges in Spatial Transcriptomics
Shuangsang Fang, Bichao Chen, Yong Zhang, et al.
Genomics Proteomics & Bioinformatics (2022) Vol. 21, Iss. 1, pp. 24-47
Open Access | Times Cited: 72
Single-cell and spatial transcriptomics reveal aberrant lymphoid developmental programs driving granuloma formation
Thomas Krausgruber, Anna Redl, Daniele Barreca, et al.
Immunity (2023) Vol. 56, Iss. 2, pp. 289-306.e7
Open Access | Times Cited: 71
MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
Robin Browaeys, Jeroen Gilis, Chananchida Sang-aram, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 71
A Review of Single-Cell RNA-Seq Annotation, Integration, and Cell–Cell Communication
Changde Cheng, Wenan Chen, Hongjian Jin, et al.
Cells (2023) Vol. 12, Iss. 15, pp. 1970-1970
Open Access | Times Cited: 70
Liver fibrosis in NAFLD/NASH: from pathophysiology towards diagnostic and therapeutic strategies
Maurizio Parola, Massimo Pinzani
Molecular Aspects of Medicine (2023) Vol. 95, pp. 101231-101231
Open Access | Times Cited: 70
Graph embedding and Gaussian mixture variational autoencoder network for end-to-end analysis of single-cell RNA sequencing data
Junlin Xu, Jielin Xu, Yajie Meng, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 1, pp. 100382-100382
Open Access | Times Cited: 69
Advancing CAR T cell therapy through the use of multidimensional omics data
Jingwen Yang, Yamei Chen, Ying Jing, et al.
Nature Reviews Clinical Oncology (2023) Vol. 20, Iss. 4, pp. 211-228
Closed Access | Times Cited: 66
SpiceMix enables integrative single-cell spatial modeling of cell identity
Benjamin Chidester, Tianming Zhou, Shahul Alam, et al.
Nature Genetics (2023) Vol. 55, Iss. 1, pp. 78-88
Open Access | Times Cited: 62
Comparative analysis of cell–cell communication at single-cell resolution
Aaron J. Wilk, Alex K. Shalek, Susan Holmes, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 3, pp. 470-483
Open Access | Times Cited: 61
The diversification of methods for studying cell–cell interactions and communication
Erick Armingol, Hratch Baghdassarian, Nathan E. Lewis
Nature Reviews Genetics (2024) Vol. 25, Iss. 6, pp. 381-400
Closed Access | Times Cited: 53
Single-cell profiling to explore pancreatic cancer heterogeneity, plasticity and response to therapy
Stefanie Bärthel, Chiara Falcomatà, Roland Rad, et al.
Nature Cancer (2023) Vol. 4, Iss. 4, pp. 454-467
Open Access | Times Cited: 52
Estimation of cell lineages in tumors from spatial transcriptomics data
Beibei Ru, Jinlin Huang, Yu Zhang, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 50
SpatialDM for rapid identification of spatially co-expressed ligand–receptor and revealing cell–cell communication patterns
Zhuoxuan Li, Tianjie Wang, Pentao Liu, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 46
Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat
Wei Zhao, Kevin G. Johnston, Honglei Ren, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 44

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