OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Optimized single-nucleus transcriptional profiling by combinatorial indexing
Beth Martin, Chengxiang Qiu, Eva K. Nichols, et al.
Nature Protocols (2022) Vol. 18, Iss. 1, pp. 188-207
Open Access | Times Cited: 81
Beth Martin, Chengxiang Qiu, Eva K. Nichols, et al.
Nature Protocols (2022) Vol. 18, Iss. 1, pp. 188-207
Open Access | Times Cited: 81
Showing 26-50 of 81 citing articles:
Scalable single-cell profiling of chromatin modifications with sciCUT&Tag
Derek H. Janssens, Jacob E. Greene, Steven J. Wu, et al.
Nature Protocols (2023) Vol. 19, Iss. 1, pp. 83-112
Open Access | Times Cited: 14
Derek H. Janssens, Jacob E. Greene, Steven J. Wu, et al.
Nature Protocols (2023) Vol. 19, Iss. 1, pp. 83-112
Open Access | Times Cited: 14
Reconstructing developmental trajectories using latent dynamical systems and time-resolved transcriptomics
Rory J. Maizels, Daniel M. Snell, James Briscoe
Cell Systems (2024) Vol. 15, Iss. 5, pp. 411-424.e9
Open Access | Times Cited: 6
Rory J. Maizels, Daniel M. Snell, James Briscoe
Cell Systems (2024) Vol. 15, Iss. 5, pp. 411-424.e9
Open Access | Times Cited: 6
A panoramic view of cell population dynamics in mammalian aging
Zehao Zhang, Chloe Schaefer, Weirong Jiang, et al.
Science (2024)
Open Access | Times Cited: 6
Zehao Zhang, Chloe Schaefer, Weirong Jiang, et al.
Science (2024)
Open Access | Times Cited: 6
Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq
Joseph M. Replogle, Reuben A. Saunders, Angela N. Pogson, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 28
Joseph M. Replogle, Reuben A. Saunders, Angela N. Pogson, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 28
Frontiers and techniques in plant gene regulation
Tobias Jores, Morgan O. Hamm, Josh T. Cuperus, et al.
Current Opinion in Plant Biology (2023) Vol. 75, pp. 102403-102403
Open Access | Times Cited: 13
Tobias Jores, Morgan O. Hamm, Josh T. Cuperus, et al.
Current Opinion in Plant Biology (2023) Vol. 75, pp. 102403-102403
Open Access | Times Cited: 13
A high‐throughput single‐cell RNA expression profiling method identifies human pericyte markers
Andras Sziraki, Yu Zhong, Allison M. Neltner, et al.
Neuropathology and Applied Neurobiology (2023) Vol. 49, Iss. 6
Closed Access | Times Cited: 12
Andras Sziraki, Yu Zhong, Allison M. Neltner, et al.
Neuropathology and Applied Neurobiology (2023) Vol. 49, Iss. 6
Closed Access | Times Cited: 12
Analysis of Haemonchus embryos at single cell resolution identifies two eukaryotic elongation factors as intervention target candidates
Pasi K. Korhonen, Tao Wang, Neil D. Young, et al.
Computational and Structural Biotechnology Journal (2024)
Open Access | Times Cited: 4
Pasi K. Korhonen, Tao Wang, Neil D. Young, et al.
Computational and Structural Biotechnology Journal (2024)
Open Access | Times Cited: 4
Advanced sequencing-based high-throughput and long-read single-cell transcriptome analysis
Shanqing Huang, Weixiong Shi, Shiyu Li, et al.
Lab on a Chip (2024) Vol. 24, Iss. 10, pp. 2601-2621
Closed Access | Times Cited: 4
Shanqing Huang, Weixiong Shi, Shiyu Li, et al.
Lab on a Chip (2024) Vol. 24, Iss. 10, pp. 2601-2621
Closed Access | Times Cited: 4
High-throughput single-cell transcriptomics of bacteria using combinatorial barcoding
Karl D. Gaisser, Sophie N. Skloss, Leandra Brettner, et al.
Nature Protocols (2024)
Closed Access | Times Cited: 4
Karl D. Gaisser, Sophie N. Skloss, Leandra Brettner, et al.
Nature Protocols (2024)
Closed Access | Times Cited: 4
Morphological profiling for drug discovery in the era of deep learning
Qiaosi Tang, Ranjala Ratnayake, Gustavo Seabra, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 4
Open Access | Times Cited: 4
Qiaosi Tang, Ranjala Ratnayake, Gustavo Seabra, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 4
Open Access | Times Cited: 4
MYT1L deficiency impairs excitatory neuron trajectory during cortical development
Allen Yen, Simona Sarafinovska, Xuhua Chen, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4
Allen Yen, Simona Sarafinovska, Xuhua Chen, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4
Brain aging and rejuvenation at single-cell resolution
Eric Sun, Rahul Nagvekar, Angela N. Pogson, et al.
Neuron (2025) Vol. 113, Iss. 1, pp. 82-108
Open Access
Eric Sun, Rahul Nagvekar, Angela N. Pogson, et al.
Neuron (2025) Vol. 113, Iss. 1, pp. 82-108
Open Access
An overview of single-cell high-throughput technology in plants
Lucas Auroux, Lim Chee Liew, Mathew G. Lewsey
Elsevier eBooks (2025), pp. 1-34
Closed Access
Lucas Auroux, Lim Chee Liew, Mathew G. Lewsey
Elsevier eBooks (2025), pp. 1-34
Closed Access
Single-cell technology for disease-resistant plants
Lingaraj Dip, Akbar Hossain, Srikrushna Behera, et al.
Elsevier eBooks (2025), pp. 111-132
Closed Access
Lingaraj Dip, Akbar Hossain, Srikrushna Behera, et al.
Elsevier eBooks (2025), pp. 111-132
Closed Access
An overview of single-cell omics, spatial omics, and omics integration in axon regeneration
Michael Coronado, Emily Neag, Nikhil Gandikota, et al.
Elsevier eBooks (2025), pp. 425-437
Closed Access
Michael Coronado, Emily Neag, Nikhil Gandikota, et al.
Elsevier eBooks (2025), pp. 425-437
Closed Access
Transcriptional Heterogeneity and Differential Response of Rod Photoreceptor Pathway Uncovered by Single‐Cell RNA Sequencing of the Aging Mouse Retina
Laura Campello, Matthew J. Brooks, Benjamin R. Fadl, et al.
Aging Cell (2025)
Open Access
Laura Campello, Matthew J. Brooks, Benjamin R. Fadl, et al.
Aging Cell (2025)
Open Access
Genetic context of transgene insertion can influence neurodevelopment in zebrafish
Anna J. Moyer, Alexia K Barcus, Mary E.S. Capps, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Anna J. Moyer, Alexia K Barcus, Mary E.S. Capps, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
An Improved, High-Yield Method for Isolating Nuclei from Individual Zebrafish Embryos for Single-Nucleus RNA Sequencing
Clifford Rostomily, Heidi Lee, Amy Tresenrider, et al.
Zebrafish (2025)
Open Access
Clifford Rostomily, Heidi Lee, Amy Tresenrider, et al.
Zebrafish (2025)
Open Access
Single-nucleus transcriptional profiling of the placenta reveals the syncytiotrophoblast stress response to COVID-19
Rachel A. Keuls, Scott A. Ochsner, Mary B. O’Neill, et al.
American Journal of Obstetrics and Gynecology (2025) Vol. 232, Iss. 4, pp. S160-S175.e7
Open Access
Rachel A. Keuls, Scott A. Ochsner, Mary B. O’Neill, et al.
American Journal of Obstetrics and Gynecology (2025) Vol. 232, Iss. 4, pp. S160-S175.e7
Open Access
High-resolution transcriptome analysis on a mouse model of neonatal hypoxic-ischemic encephalopathy using single-nucleus RNA-seq
Nao Wakui, Takashi Shimbo, Morifumi Hanawa, et al.
Biochemistry and Biophysics Reports (2025) Vol. 42, pp. 102026-102026
Closed Access
Nao Wakui, Takashi Shimbo, Morifumi Hanawa, et al.
Biochemistry and Biophysics Reports (2025) Vol. 42, pp. 102026-102026
Closed Access
Four-Core Genotypes mice harbour a 3.2MB X-Y translocation that perturbs Tlr7 dosage
Jasper Panten, Stefania Prete, James Cleland, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
Jasper Panten, Stefania Prete, James Cleland, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
Protocol for multimodal profiling of human kidneys with simultaneous high-throughput ATAC and RNA expression with sequencing
Haikuo Li, Benjamin D. Humphreys
STAR Protocols (2024) Vol. 5, Iss. 3, pp. 103049-103049
Open Access | Times Cited: 2
Haikuo Li, Benjamin D. Humphreys
STAR Protocols (2024) Vol. 5, Iss. 3, pp. 103049-103049
Open Access | Times Cited: 2
Deep dynamical modelling of developmental trajectories with temporal transcriptomics
Rory J. Maizels, Daniel M. Snell, James Briscoe
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
Rory J. Maizels, Daniel M. Snell, James Briscoe
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
Different effects of CYP27A1 and CYP7B1 on cognitive function: Two mouse models in comparison
Julen Goikolea, María Latorre‐Leal, Christina Tsagkogianni, et al.
The Journal of Steroid Biochemistry and Molecular Biology (2023) Vol. 234, pp. 106387-106387
Open Access | Times Cited: 6
Julen Goikolea, María Latorre‐Leal, Christina Tsagkogianni, et al.
The Journal of Steroid Biochemistry and Molecular Biology (2023) Vol. 234, pp. 106387-106387
Open Access | Times Cited: 6
An exploration of vascular cell development in mouse embryoid bodies under hypoxia through single cell RNA-seq
Bárbara Acosta‐Iborra, Laura Puente-Santamaría, Yosra Berrouayel, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 2
Bárbara Acosta‐Iborra, Laura Puente-Santamaría, Yosra Berrouayel, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 2
