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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

CHARMM-GUI supports the Amber force fields
Jumin Lee, Manuel Hitzenberger, Manuel Rieger, et al.
The Journal of Chemical Physics (2020) Vol. 153, Iss. 3
Open Access | Times Cited: 280

Showing 26-50 of 280 citing articles:

Structural basis of leukotriene B4 receptor 1 activation
Na Wang, Xinheng He, Jing Zhao, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 32
Structural basis of adhesion GPCR GPR110 activation by stalk peptide and G-proteins coupling
Xinyan Zhu, Qian Yu, Xiaowan Li, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 31
Effects of presenilin-1 familial Alzheimer’s disease mutations on γ-secretase activation for cleavage of amyloid precursor protein
N. Hung, Sujan Devkota, Apurba Bhattarai, et al.
Communications Biology (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 20
pyCHARMM: Embedding CHARMM Functionality in a Python Framework
Joshua Buckner, Xiaorong Liu, Arghya Chakravorty, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 12, pp. 3752-3762
Closed Access | Times Cited: 19
Quantitative Comparison against Experiments Reveals Imperfections in Force Fields’ Descriptions of POPC–Cholesterol Interactions
Matti Javanainen, Peter Heftberger, Jesper J. Madsen, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 18, pp. 6342-6352
Open Access | Times Cited: 18
AMBERff at Scale: Multimillion-Atom Simulations with AMBER Force Fields in NAMD
Santiago Antolínez, Peter Eugene Jones, J. C. Phillips, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 2, pp. 543-554
Open Access | Times Cited: 7
Synergistic effect of potential alpha-amylase inhibitors from Egyptian propolis with acarbose using in silico and in vitro combination analysis
Ahmed A. Nada, Aly M. Metwally, Aya M. Asaad, et al.
BMC Complementary Medicine and Therapies (2024) Vol. 24, Iss. 1
Open Access | Times Cited: 6
The antimicrobial potential of adarotene derivatives against Staphylococcus aureus strains
Salvatore Princiotto, Bruno Casciaro, Álvaro G. Temprano, et al.
Bioorganic Chemistry (2024) Vol. 145, pp. 107227-107227
Open Access | Times Cited: 6
Molecular insights into human phosphatidylserine synthase 1 reveal its inhibition promotes LDL uptake
Tao Long, Dongyu Li, Gonçalo Vale, et al.
Cell (2024) Vol. 187, Iss. 20, pp. 5665-5678.e18
Closed Access | Times Cited: 6
Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates
Shan Zhou, Weiwei Wang, Xiaoting Zhou, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 39
CHARMM‐GUI Drude prepper for molecular dynamics simulation using the classical Drude polarizable force field
Abhishek A. Kognole, Jumin Lee, Sang‐Jun Park, et al.
Journal of Computational Chemistry (2021) Vol. 43, Iss. 5, pp. 359-375
Open Access | Times Cited: 35
Synthesis of 4-substituted benzyl-2-triazole-linked-tryptamine-paeonol derivatives and evaluation of their selective inhibitions against butyrylcholinesterase and monoamine oxidase-B
Jong‐Min Oh, Yujung Kang, Ji Hyun Hwang, et al.
International Journal of Biological Macromolecules (2022) Vol. 217, pp. 910-921
Closed Access | Times Cited: 23
Martini on the Rocks: Can a Coarse-Grained Force Field Model Crystals?
A. Hosseini, David van der Spoel
The Journal of Physical Chemistry Letters (2024) Vol. 15, Iss. 4, pp. 1079-1088
Open Access | Times Cited: 5
Exploring the dynamics of the ABCB1 membrane transporter P-glycoprotein in the presence of ATP and active/non-active compounds through molecular dynamics simulations
Liadys Mora Lagares, Yunierkis Pérez‐Castillo, Marjana Novič
Toxicology (2024) Vol. 502, pp. 153732-153732
Open Access | Times Cited: 5
Computational insights into the circular permutation roles on ConA binding and structural stability
Vinicius José Silva Osterne, Vanir Reis Pinto‐Junior, Messias Vital Oliveira, et al.
Current Research in Structural Biology (2024) Vol. 7, pp. 100140-100140
Open Access | Times Cited: 5
Synthesis and biological evaluation of Halogen-Substituted novel α-Ketoamides as potential protein aggregation modulators in Alzheimer’s disease
Bhanuranjan Das, Anurag T. K. Baidya, Sourabh Chakrabarti, et al.
Bioorganic Chemistry (2024) Vol. 147, pp. 107373-107373
Closed Access | Times Cited: 5
The effect of simultaneous binding of doxorubicin and cyclophosphamide on the human serum albumin structure
Urszula Śliwińska-Hill, Edward Krzyżak, Żaneta Czyżnikowska
Journal of Molecular Liquids (2024) Vol. 404, pp. 125003-125003
Closed Access | Times Cited: 5
CHARMM-GUI QM/MM Interfacer for a Quantum Mechanical and Molecular Mechanical (QM/MM) Simulation Setup: 1. Semiempirical Methods
Donghyuk Suh, Abdul Raafik Arattu Thodika, Seonghoon Kim, et al.
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 12, pp. 5337-5351
Open Access | Times Cited: 5
All-Atom Simulations of Human ACE2-Spike Protein RBD Complexes for SARS-CoV-2 and Some of its Variants: Nature of Interactions and Free Energy Diagrams for Dissociation of the Protein Complexes
Saheb Dutta, Bhavana Panthi, Amalendu Chandra
The Journal of Physical Chemistry B (2022) Vol. 126, Iss. 29, pp. 5375-5389
Closed Access | Times Cited: 20
CHARMM‐GUIhigh‐throughput simulator for efficient evaluation of protein–ligand interactions with different force fields
Hugo Guterres, Sang‐Jun Park, Han Zhang, et al.
Protein Science (2022) Vol. 31, Iss. 9
Open Access | Times Cited: 20
CHARMM‐GUI Enhanced Sampler for various collective variables and enhanced sampling methods
Donghyuk Suh, Shasha Feng, Hwa-Young Lee, et al.
Protein Science (2022) Vol. 31, Iss. 11
Open Access | Times Cited: 20
An Affordable Topography-Based Protocol for Assigning a Residue’s Character on a Hydropathy (PARCH) Scale
Jingjing Ji, Britnie Carpentier, Arindam Chakraborty, et al.
Journal of Chemical Theory and Computation (2023) Vol. 20, Iss. 4, pp. 1656-1672
Open Access | Times Cited: 11
Phytochemical Composition,In VitroAntimicrobial, Antioxidant, and Enzyme Inhibition Activities, andIn SilicoMolecular Docking and Dynamics Simulations ofCentaurea lycaonica: A Computational and Experimental Approach
Hanifa Fatullayev, Leyla Paşayeva, İsmail Çeli̇k, et al.
ACS Omega (2023) Vol. 8, Iss. 25, pp. 22854-22865
Open Access | Times Cited: 11
PHARMACOINFORMATICS ANALYSIS OF MORUS MACROURA FOR DRUG DISCOVERY AND DEVELOPMENT
Purnawan Pontana Putra, Aiyi Asnawi, FARIZA HAMDAYUNI, et al.
International Journal of Applied Pharmaceutics (2024), pp. 111-117
Open Access | Times Cited: 4
Synthesis, insertion, and characterization of SARS-CoV-2 membrane protein within lipid bilayers
Yuanzhong Zhang, Sara Anbir, Joseph McTiernan, et al.
Science Advances (2024) Vol. 10, Iss. 9
Open Access | Times Cited: 4

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