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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

CPPred: coding potential prediction based on the global description of RNA sequence
Xiaoxue Tong, Shiyong Liu
Nucleic Acids Research (2019) Vol. 47, Iss. 8, pp. e43-e43
Open Access | Times Cited: 116

Showing 26-50 of 116 citing articles:

LncCat: An ORF attention model to identify LncRNA based on ensemble learning strategy and fused sequence information
Hongqi Feng, Shaocong Wang, Yan Wang, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 1433-1447
Open Access | Times Cited: 10
A survey of computational methods and databases for lncRNA-miRNA interaction prediction
Nan Sheng, Lan Huang, Ling Gao, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2023) Vol. 20, Iss. 5, pp. 2810-2826
Open Access | Times Cited: 10
How natural language processing derived techniques are used on biological data: a systematic review
Emmanouil D. Oikonomou, Petros Karvelis, Νικόλαος Γιαννακέας, et al.
Network Modeling Analysis in Health Informatics and Bioinformatics (2024) Vol. 13, Iss. 1
Open Access | Times Cited: 3
Prediction of Coding and Non-Coding RNAs
Shrijit Jaigopal, Ganga Ram Chaudhary, Uditi D. Arora, et al.
Elsevier eBooks (2025)
Closed Access
Leveraging explainable multi-scale features for fine-grained circRNA-miRNA interaction prediction
Li Peng, Wang Wang, Zhiyuan Yang, et al.
BMC Biology (2025) Vol. 23, Iss. 1
Open Access
CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts
Pedro G. Nachtigall, André Yoshiaki Kashiwabara, Alan Mitchell Durham
Briefings in Bioinformatics (2020) Vol. 22, Iss. 3
Open Access | Times Cited: 26
Large-Scale Multiplexing Permits Full-Length Transcriptome Annotation of 32 Bovine Tissues From a Single Nanopore Flow Cell
Michelle M. Halstead, Alma Islas‐Trejo, Daniel E. Goszczynski, et al.
Frontiers in Genetics (2021) Vol. 12
Open Access | Times Cited: 23
Advances in Computational Methodologies for Classification and Sub-Cellular Locality Prediction of Non-Coding RNAs
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Muhammad Imran Malik, et al.
International Journal of Molecular Sciences (2021) Vol. 22, Iss. 16, pp. 8719-8719
Open Access | Times Cited: 22
sORFPred: A Method Based on Comprehensive Features and Ensemble Learning to Predict the sORFs in Plant LncRNAs
Ziwei Chen, Jun Meng, Siyuan Zhao, et al.
Interdisciplinary Sciences Computational Life Sciences (2023) Vol. 15, Iss. 2, pp. 189-201
Closed Access | Times Cited: 8
Identification of small open reading frames in plant lncRNA using class-imbalance learning
Siyuan Zhao, Jun Meng, Jael Sanyanda Wekesa, et al.
Computers in Biology and Medicine (2023) Vol. 157, pp. 106773-106773
Closed Access | Times Cited: 8
PredLnc-GFStack: A Global Sequence Feature Based on a Stacked Ensemble Learning Method for Predicting lncRNAs from Transcripts
Shuai Liu, Xiaohan Zhao, Guangyan Zhang, et al.
Genes (2019) Vol. 10, Iss. 9, pp. 672-672
Open Access | Times Cited: 23
m5U-GEPred: prediction of RNA 5-methyluridine sites based on sequence-derived and graph embedding features
Zhongxing Xu, Xuan Wang, Jia Meng, et al.
Frontiers in Microbiology (2023) Vol. 14
Open Access | Times Cited: 7
Predicting Coding Potential of RNA Sequences by Solving Local Data Imbalance
Chen Xiangan, Shuai Liu, Wen Zhang
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2020) Vol. 19, Iss. 2, pp. 1075-1083
Closed Access | Times Cited: 19
Genomic Landscapes of Noncoding RNAs Regulating VEGFA and VEGFC Expression in Endothelial Cells
Isidore Mushimiyimana, Vanesa Tomas Bosch, Henri Niskanen, et al.
Molecular and Cellular Biology (2021) Vol. 41, Iss. 7
Open Access | Times Cited: 17
LGFC-CNN: Prediction of lncRNA-Protein Interactions by Using Multiple Types of Features through Deep Learning
Lan Huang, Shaoqing Jiao, Sen Yang, et al.
Genes (2021) Vol. 12, Iss. 11, pp. 1689-1689
Open Access | Times Cited: 16
Enhancing the prediction of protein coding regions in biological sequence via a deep learning framework with hybrid encoding
Chao Wei, Junying Zhang, Xiguo Yuan
Digital Signal Processing (2022) Vol. 123, pp. 103430-103430
Open Access | Times Cited: 12
Meta-2OM: A multi-classifier meta-model for the accurate prediction of RNA 2′-O-methylation sites in human RNA
Md. Harun-Or-Roshid, Nhat Truong Pham, Balachandran Manavalan, et al.
PLoS ONE (2024) Vol. 19, Iss. 6, pp. e0305406-e0305406
Open Access | Times Cited: 2
PLEKv2: predicting lncRNAs and mRNAs based on intrinsic sequence features and the coding-net model
Aimin Li, Haotian Zhou, Siqi Xiong, et al.
BMC Genomics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
The role of polypeptides encoded by ncRNAs in cancer
Jiayuan Huang, Ping Yang, Wei Pan, et al.
Gene (2024) Vol. 928, pp. 148817-148817
Closed Access | Times Cited: 2
ncRNA Coding Potential Prediction Using BiLSTM and Transformer Encoder-Based Model
Jingpu Zhang, Hao Lu, Jiang Ying, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 16, pp. 6712-6722
Closed Access | Times Cited: 2
Elucidating the Functional Roles of Long Non-Coding RNAs in Alzheimer’s Disease
Zhenyu Huang, Qiufen Chen, Xuechen Mu, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 17, pp. 9211-9211
Open Access | Times Cited: 2
A systematic review of computational methods for predicting long noncoding RNAs
Xinran Xu, Shuai Liu, Zhihao Yang, et al.
Briefings in Functional Genomics (2021) Vol. 20, Iss. 3, pp. 162-173
Closed Access | Times Cited: 15
A systematic evaluation of the computational tools for lncRNA identification
Hansi Zheng, Amlan Talukder, Xiaoman Li, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 6
Closed Access | Times Cited: 15
Prediction of protein-coding small ORFs in multi-species using integrated sequence-derived features and the random forest model
Jiafeng Yu, Wenwen Jiang, Sen-Bin Zhu, et al.
Methods (2023) Vol. 210, pp. 10-19
Closed Access | Times Cited: 6
ABLNCPP: Attention Mechanism-Based Bidirectional Long Short-Term Memory for Noncoding RNA Coding Potential Prediction
Lei Deng, Jiang Ying, Xiaowen Hu, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 12, pp. 3955-3966
Closed Access | Times Cited: 6

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