OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Taxonomy‐free molecular diatom index for high‐throughput eDNA biomonitoring
Laure Apothéloz‐Perret‐Gentil, Arielle Cordonier, François Straub, et al.
Molecular Ecology Resources (2017) Vol. 17, Iss. 6, pp. 1231-1242
Closed Access | Times Cited: 161

Showing 26-50 of 161 citing articles:

Tagsteady: A metabarcoding library preparation protocol to avoid false assignment of sequences to samples
Christian Carøe, Kristine Bohmann
Molecular Ecology Resources (2020) Vol. 20, Iss. 6, pp. 1620-1631
Open Access | Times Cited: 77

Benthic algae assessments in the EU and the US: Striving for consistency in the face of great ecological diversity
Donald F. Charles, Martyn Kelly, R. Jan Stevenson, et al.
Ecological Indicators (2020) Vol. 121, pp. 107082-107082
Open Access | Times Cited: 76

Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization
Bonnie Bailet, Laure Apothéloz‐Perret‐Gentil, Ana Baričević, et al.
The Science of The Total Environment (2020) Vol. 745, pp. 140948-140948
Open Access | Times Cited: 73

Ecosystem services provided by freshwater and marine diatoms
Viktória B‐Béres, Csilla Stenger‐Kovács, Krisztina Buczkó, et al.
Hydrobiologia (2022) Vol. 850, Iss. 12-13, pp. 2707-2733
Open Access | Times Cited: 59

Comparing microscopy and DNA metabarcoding techniques for identifying cyanobacteria assemblages across hundreds of lakes
Paul W. MacKeigan, Rebecca E. Garner, Marie‐Ève Monchamp, et al.
Harmful Algae (2022) Vol. 113, pp. 102187-102187
Open Access | Times Cited: 45

eDITH: An R‐package to spatially project eDNA‐based biodiversity across river networks with minimal prior information
Luca Carraro, Florian Altermatt
Methods in Ecology and Evolution (2024) Vol. 15, Iss. 5, pp. 806-815
Open Access | Times Cited: 10

Measuring the state of aquatic environments using eDNA—upscaling spatial resolution of biotic indices
Rosetta C. Blackman, Luca Carraro, François Keck, et al.
Philosophical Transactions of the Royal Society B Biological Sciences (2024) Vol. 379, Iss. 1904
Open Access | Times Cited: 9

Utilizing aquatic environmental DNA to address global biodiversity targets
Florian Altermatt, Marjorie Couton, Luca Carraro, et al.
(2025)
Closed Access | Times Cited: 1

Genetic monitoring of open ocean biodiversity: An evaluation of DNA metabarcoding for processing continuous plankton recorder samples
Bruce E. Deagle, Laurence J. Clarke, John A. Kitchener, et al.
Molecular Ecology Resources (2017) Vol. 18, Iss. 3, pp. 391-406
Closed Access | Times Cited: 87

Metabarcoding of benthic ciliate communities shows high potential for environmental monitoring in salmon aquaculture
Thorsten Stoeck, Rebecca Kochems, Dominik Forster, et al.
Ecological Indicators (2017) Vol. 85, pp. 153-164
Closed Access | Times Cited: 85

Diatom DNA Metabarcoding for Biomonitoring: Strategies to Avoid Major Taxonomical and Bioinformatical Biases Limiting Molecular Indices Capacities
Kálmán Tapolczai, François Keck, Agnès Bouchez, et al.
Frontiers in Ecology and Evolution (2019) Vol. 7
Open Access | Times Cited: 76

SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data
Yoann Dufresne, Franck Lejzerowicz, Laure Apotheloz Perret-Gentil, et al.
BMC Bioinformatics (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 70

Molecular versus morphological data for benthic diatoms biomonitoring in Northern Europe freshwater and consequences for ecological status
Bonnie Bailet, Agnès Bouchez, Alain Franc, et al.
Metabarcoding and Metagenomics (2019) Vol. 3
Open Access | Times Cited: 69

Assessing the effect of mercury pollution on cultured benthic foraminifera community using morphological and eDNA metabarcoding approaches
Fabrizio Frontalini, Mattia Greco, Letizia Di Bella, et al.
Marine Pollution Bulletin (2017) Vol. 129, Iss. 2, pp. 512-524
Open Access | Times Cited: 67

Monitoring the ecological status of rivers with diatom eDNA metabarcoding: A comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index
Laure Apothéloz‐Perret‐Gentil, Agnès Bouchez, Tristan Cordier, et al.
Molecular Ecology (2020) Vol. 30, Iss. 13, pp. 2959-2968
Open Access | Times Cited: 65

Boosting DNA metabarcoding for biomonitoring with phylogenetic estimation of operational taxonomic units’ ecological profiles
François Keck, Valentin Vasselon, Frédéric Rimet, et al.
Molecular Ecology Resources (2018) Vol. 18, Iss. 6, pp. 1299-1309
Open Access | Times Cited: 63

Do we similarly assess diversity with microscopy and high-throughput sequencing? Case of microalgae in lakes
Frédéric Rimet, Valentin Vasselon, Barbara A.-Keszte, et al.
Organisms Diversity & Evolution (2018) Vol. 18, Iss. 1, pp. 51-62
Closed Access | Times Cited: 61

Diatom metabarcoding applied to large scale monitoring networks: Optimization of bioinformatics strategies using Mothur software
Sinziana F. Rivera, Valentin Vasselon, Agnès Bouchez, et al.
Ecological Indicators (2019) Vol. 109, pp. 105775-105775
Open Access | Times Cited: 57

Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding
Gentile Francesco Ficetola, Frédéric Boyer, Alice Valentini, et al.
Molecular Ecology (2020) Vol. 30, Iss. 13, pp. 3189-3202
Open Access | Times Cited: 54

Benthic Diatoms in River Biomonitoring—Present and Future Perspectives within the Water Framework Directive
Ανδρέας Μασούρας, Ioannis Karaouzas, Elias Dimitriou, et al.
Water (2021) Vol. 13, Iss. 4, pp. 478-478
Open Access | Times Cited: 49

A strategy for successful integration of DNA-based methods in aquatic monitoring
Philippe Blancher, E. Lefrançois, Frédéric Rimet, et al.
Metabarcoding and Metagenomics (2022) Vol. 6
Open Access | Times Cited: 31

Genetic Markers for Metabarcoding of Freshwater Microalgae: Review
Elena Kezlya, Natalia D. Tseplik, Maxim Kulikovskiy
Biology (2023) Vol. 12, Iss. 7, pp. 1038-1038
Open Access | Times Cited: 19

The impact of OTU sequence similarity threshold on diatom‐based bioassessment: A case study of the rivers of Mayotte (France, Indian Ocean)
Kálmán Tapolczai, Valentin Vasselon, Agnès Bouchez, et al.
Ecology and Evolution (2018) Vol. 9, Iss. 1, pp. 166-179
Open Access | Times Cited: 54

Streams of data from drops of water: 21st century molecular microbial ecology
Dave R. Clark, Robert Ferguson, Danielle N. Harris, et al.
Wiley Interdisciplinary Reviews Water (2018) Vol. 5, Iss. 4
Open Access | Times Cited: 53

Morphology and metabarcoding: a test with stream diatoms from Mexico highlights the complementarity of identification methods
Demetrio Mora, Nélida Abarca, Sebastian Proft, et al.
Freshwater Science (2019) Vol. 38, Iss. 3, pp. 448-464
Open Access | Times Cited: 48

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