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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

The continuum of Drosophila embryonic development at single-cell resolution
Diego Calderon, Ronnie Blecher‐Gonen, Xingfan Huang, et al.
Science (2022) Vol. 377, Iss. 6606
Open Access | Times Cited: 71

Showing 26-50 of 71 citing articles:

Chromatin landscape at cis-regulatory elements orchestrates cell fate decisions in early embryogenesis
Francesco Cardamone, Annamaria Piva, Eva Löser, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Single-cell analysis of the early Drosophila salivary gland reveals that morphogenetic control involves both the induction and exclusion of gene expression programs
Annabel May, Katja Röper
PLoS Biology (2025) Vol. 23, Iss. 4, pp. e3003133-e3003133
Open Access
Recently evolved, stage-specific genes are enriched at life stage transitions in flies
Andreas Remmel, Karl K. Käther, Peter F. Stadler, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
Optimal transport reveals dynamic gene regulatory networks via gene velocity estimation
Wenjun Zhao, Erica Larschan, Björn Sandstede, et al.
PLoS Computational Biology (2025) Vol. 21, Iss. 5, pp. e1012476-e1012476
Open Access
Continuous transcriptome analysis reveals novel patterns of early gene expression in Drosophila embryos
J. Eduardo Pérez-Mojica, Lennart Enders, Joseph Walsh, et al.
Cell Genomics (2023) Vol. 3, Iss. 3, pp. 100265-100265
Open Access | Times Cited: 9
Modulation of transcription burst amplitude underpins dosage compensation in the Drosophila embryo
Lauren Forbes Beadle, Hongpeng Zhou, Magnus Rattray, et al.
Cell Reports (2023) Vol. 42, Iss. 4, pp. 112382-112382
Open Access | Times Cited: 9
SpatialQC: automated quality control for spatial transcriptome data
Guangyao Mao, Yi Yang, Zhuojuan Luo, et al.
Bioinformatics (2024) Vol. 40, Iss. 8
Open Access | Times Cited: 2
Single-cell transcriptomics dissecting the development and evolution of nervous system in insects
Weiwei Liu, Qiye Li
Current Opinion in Insect Science (2024) Vol. 63, pp. 101201-101201
Closed Access | Times Cited: 2
Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
Gefei Wang, Jia Zhao, Yan Yan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
Antennapedia: The complexity of a master developmental transcription factor
Marco Rosales‐Vega, Diana Reséndez‐Pérez, Martha Vâzquez
genesis (2023) Vol. 62, Iss. 1
Open Access | Times Cited: 4
A single-cell 3D spatiotemporal multi-omics atlas fromDrosophilaembryogenesis to metamorphosis
Mingyue Wang, Qinan Hu, Zhencheng Tu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Temporal and spatial niche partitioning in a retrotransposon community of the Drosophila genome
Marion Varoqui, Mourdas Mohamed, Bruno Mugat, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Hierarchical annotation of eQTLs by H-eQTL enables identification of genes with cell type-divergent regulation
Pawel F. Przytycki, Katherine S. Pollard
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 1
Chromatin accessibility is a two-tier process regulated by transcription factor pioneering and enhancer activation
Kaelan Brennan, Melanie Weilert, Sabrina Krueger, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 6
CRISPR/Cas9 and FLP-FRT mediated regulatory dissection of the BX-C of Drosophila melanogaster
Nikhil Hajirnis, Shubhanshu Pandey, Rakesh K. Mishra
Chromosome Research (2023) Vol. 31, Iss. 1
Open Access | Times Cited: 3
Integrating massive RNA-seq data to elucidate transcriptome dynamics in Drosophila melanogaster
Sheng Hu Qian, Mengwei Shi, Dan‐Yang Wang, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 4
Open Access | Times Cited: 3
Cell-specific occupancy dynamics between the pioneer-like factor Opa/ZIC and Ocelliless/OTX regulate early head development in embryos
Kelli D. Fenelon, Fan Gao, Priyanshi Borad, et al.
Frontiers in Cell and Developmental Biology (2023) Vol. 11
Open Access | Times Cited: 2
scNODE : Generative Model for Temporal Single Cell Transcriptomic Data Prediction
Jiaqi Zhang, Erica Larschan, Jeremy Bigness, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
GAGA zinc finger transcription factor searches chromatin by 1D-3D facilitated diffusion
Xinyu A. Feng, Maryam Yamadi, Yiben Fu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
Unraveling cell differentiation mechanisms through topological exploration of single-cell developmental trajectories
Emanuel Flores-Bautista, Matt Thomson
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
Widespread priming of transcriptional regulatory elements by incipient accessibility or RNA polymerase II pause in early embryos of the sea urchin Strongylocentrotus purpuratus
César Arenas‐Mena, Serhat Akin
Genetics (2023) Vol. 225, Iss. 2
Open Access | Times Cited: 1
Cnidofest 2022: hot topics in cnidarian research
James M. Gahan, Paulyn Cartwright, Matthew L. Nicotra, et al.
EvoDevo (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 1
Single-cell transcriptomics illuminates regulatory steps driving anterior-posterior patterning of Drosophila embryonic mesoderm
Jingjing Sun, Chen Zhang, Fan Gao, et al.
Cell Reports (2023) Vol. 42, Iss. 10, pp. 113289-113289
Open Access | Times Cited: 1
A universal molecular mechanism driving aging
Jin Wan, Jing Zheng, Yu Xiao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Let's talk about sex: Mechanisms of neural sexual differentiation in Bilateria
Emma C. Roggenbuck, Elijah A. Hall, I Hanson, et al.
WIREs Mechanisms of Disease (2024) Vol. 16, Iss. 2
Open Access

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