OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome
Luigi Faino, Michael Seidl, Erwin Datema, et al.
mBio (2015) Vol. 6, Iss. 4
Open Access | Times Cited: 182

Showing 26-50 of 182 citing articles:

Colletotrichum higginsianum as a Model for Understanding Host–Pathogen Interactions: A Review
Yaqin Yan, Qinfeng Yuan, Jintian Tang, et al.
International Journal of Molecular Sciences (2018) Vol. 19, Iss. 7, pp. 2142-2142
Open Access | Times Cited: 66

Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity
Paula Moolhuijzen, Pao Theen See, James K. Hane, et al.
BMC Genomics (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 63

Genomic Plasticity Mediated by Transposable Elements in the Plant Pathogenic Fungus Colletotrichum higginsianum
Ayako Tsushima, Pamela Gan, Naoyoshi Kumakura, et al.
Genome Biology and Evolution (2019) Vol. 11, Iss. 5, pp. 1487-1500
Open Access | Times Cited: 62

Evolution within the fungal genus Verticillium is characterized by chromosomal rearrangement and gene loss
Xiaoqian Shi‐Kunne, Luigi Faino, Grardy C. M. van den Berg, et al.
Environmental Microbiology (2017) Vol. 20, Iss. 4, pp. 1362-1373
Open Access | Times Cited: 62

Mildew-Omics: How Global Analyses Aid the Understanding of Life and Evolution of Powdery Mildews
Laurence V. Bindschedler, Ralph Panstruga, Pietro D. Spanu
Frontiers in Plant Science (2016) Vol. 7
Open Access | Times Cited: 61

Detection of cryptic balanced chromosomal rearrangements using high-resolution optical genome mapping
Shuo Zhang, Zhenle Pei, Caixia Lei, et al.
Journal of Medical Genetics (2022) Vol. 60, Iss. 3, pp. 274-284
Closed Access | Times Cited: 35

Chromosome-level analysis of the Colletotrichum graminicola genome reveals the unique characteristics of core and minichromosomes
Sioly Becerra, Riccardo Baroncelli, Thaís Regina Boufleur, et al.
Frontiers in Microbiology (2023) Vol. 14
Open Access | Times Cited: 17

Implications of the three-dimensional chromatin organization for genome evolution in a fungal plant pathogen
David E. Torres, H. Martin Kramer, Vittorio Tracanna, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 7

Broad taxonomic characterization of Verticillium wilt resistance genes reveals an ancient origin of the tomato Ve1 immune receptor
Yin Song, Zhao Zhang, Michael Seidl, et al.
Molecular Plant Pathology (2016) Vol. 18, Iss. 2, pp. 195-209
Open Access | Times Cited: 60

Long-Read Annotation: Automated Eukaryotic Genome Annotation Based on Long-Read cDNA Sequencing
David E. Cook, Jose Espejo Valle-Inclán, Alice Pajoro, et al.
PLANT PHYSIOLOGY (2018) Vol. 179, Iss. 1, pp. 38-54
Open Access | Times Cited: 58

Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen
Adriaan Vanheule, Kris Audenaert, Sven Warris, et al.
BMC Genomics (2016) Vol. 17, Iss. 1
Open Access | Times Cited: 56

The Age of Effectors: Genome-Based Discovery and Applications
Hesham A. Y. Gibriel, Bart P. H. J. Thomma, Michael Seidl
Phytopathology (2016) Vol. 106, Iss. 10, pp. 1206-1212
Open Access | Times Cited: 50

Gapless Genome Assembly of the Potato and Tomato Early Blight Pathogen Alternaria solani
Pieter J. Wolters, Luigi Faino, Trudy B. M. van den Bosch, et al.
Molecular Plant-Microbe Interactions (2018) Vol. 31, Iss. 7, pp. 692-694
Open Access | Times Cited: 47

A unique chromatin profile defines adaptive genomic regions in a fungal plant pathogen
David E. Cook, H. Martin Kramer, David E. Torres, et al.
eLife (2020) Vol. 9
Open Access | Times Cited: 47

Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant PathogenVerticillium dahliae
David E. Torres, Bart P. H. J. Thomma, Michael Seidl
Genome Biology and Evolution (2021) Vol. 13, Iss. 7
Open Access | Times Cited: 40

A highly polymorphic effector protein promotes fungal virulence through suppression of plant‐associated Actinobacteria
Nick C. Snelders, J.C. Boshoven, Yin Song, et al.
New Phytologist (2022) Vol. 237, Iss. 3, pp. 944-958
Open Access | Times Cited: 26

Nuclear genome organization in fungi: from gene folding to Rabl chromosomes
David E. Torres, Andrew T. Reckard, Andrew D. Klocko, et al.
FEMS Microbiology Reviews (2023) Vol. 47, Iss. 3
Open Access | Times Cited: 15

Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly ofMalassezia sympodialis
Yafeng Zhu, Pär G. Engström, Christian Tellgren‐Roth, et al.
Nucleic Acids Research (2017), pp. gkx006-gkx006
Open Access | Times Cited: 42

Verticillium wilt caused by Verticillium dahliae in woody plants with emphasis on olive and shade trees
Mojtaba Keykhasaber, Bart P. H. J. Thomma, J.A. Hiemstra
European Journal of Plant Pathology (2017) Vol. 150, Iss. 1, pp. 21-37
Open Access | Times Cited: 40

Comparative genomics reveals the in planta‐secreted Verticillium dahliae Av2 effector protein recognized in tomato plants that carry the V2 resistance locus
Edgar A. Chavarro‐Carrero, Jasper P. Vermeulen, David E. Torres, et al.
Environmental Microbiology (2020) Vol. 23, Iss. 4, pp. 1941-1958
Open Access | Times Cited: 39

Dynamic virulence‐related regions of the plant pathogenic fungus Verticillium dahliae display enhanced sequence conservation
Jasper R. L. Depotter, Xiaoqian Shi‐Kunne, Hélène Missonnier, et al.
Molecular Ecology (2019) Vol. 28, Iss. 15, pp. 3482-3495
Open Access | Times Cited: 38

Repetitive Elements Contribute to the Diversity and Evolution of Centromeres in the Fungal Genus Verticillium
Michael Seidl, H. Martin Kramer, David E. Cook, et al.
mBio (2020) Vol. 11, Iss. 5
Open Access | Times Cited: 33

Insight into the denitrification mechanism of Bacillus subtilis JD-014 and its application potential in bioremediation of nitrogen wastewater
Ting Yang, Qian Yang, Yi Shi, et al.
Process Biochemistry (2021) Vol. 103, pp. 78-86
Closed Access | Times Cited: 32

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