OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Low-Affinity Binding Sites and the Transcription Factor Specificity Paradox in Eukaryotes
Judith F. Kribelbauer, Chaitanya Rastogi, Harmen J. Bussemaker, et al.
Annual Review of Cell and Developmental Biology (2019) Vol. 35, Iss. 1, pp. 357-379
Open Access | Times Cited: 198

Showing 26-50 of 198 citing articles:

Elucidating the biology of transcription factor–DNA interaction for accurate identification of cis-regulatory elements
Mohsen Hajheidari, Shao‐shan Carol Huang
Current Opinion in Plant Biology (2022) Vol. 68, pp. 102232-102232
Open Access | Times Cited: 29

Single-nucleotide variants within heart enhancers increase binding affinity and disrupt heart development
Granton A. Jindal, Alexis Bantle, Joe J. Solvason, et al.
Developmental Cell (2023) Vol. 58, Iss. 21, pp. 2206-2216.e5
Open Access | Times Cited: 23

The molecular grammar of protein disorder guiding genome-binding locations
Felix Jonas, Miri Carmi, Beniamin Krupkin, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. 10, pp. 4831-4844
Open Access | Times Cited: 22

Decoding enhancer complexity with machine learning and high-throughput discovery
Gabrielle D Smith, Wan Hern Ching, Paola Cornejo‐Páramo, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 22

Transcriptional kinetic synergy: A complex landscape revealed by integrating modeling and synthetic biology
Rosa Martinez-Corral, Minhee Park, Kelly M. Biette, et al.
Cell Systems (2023) Vol. 14, Iss. 4, pp. 324-339.e7
Open Access | Times Cited: 21

Structural mechanism of LIN28B nucleosome targeting by OCT4
R. Guan, Tengfei Lian, Bing‐Rui Zhou, et al.
Molecular Cell (2023) Vol. 83, Iss. 12, pp. 1970-1982.e6
Open Access | Times Cited: 21

Spatiotemporal and global profiling of DNA–protein interactions enables discovery of low-affinity transcription factors
An-Di Guo, Ke‐Nian Yan, Hao Hu, et al.
Nature Chemistry (2023) Vol. 15, Iss. 6, pp. 803-814
Closed Access | Times Cited: 20

Genome access is transcription factor-specific and defined by nucleosome position
Ralph S. Grand, Marco Pregnolato, Lisa Baumgartner, et al.
Molecular Cell (2024) Vol. 84, Iss. 18, pp. 3455-3468.e6
Open Access | Times Cited: 8

Mechanisms underlying divergent responses of genetically distinct macrophages to IL-4
Marten A. Hoeksema, Zeyang Shen, Inge R. Holtman, et al.
Science Advances (2021) Vol. 7, Iss. 25
Open Access | Times Cited: 39

Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancers
Roza Berhanu Lemma, Thomas Fleischer, Emily Martinsen, et al.
Epigenetics & Chromatin (2022) Vol. 15, Iss. 1
Open Access | Times Cited: 28

Chromatin modules and their implication in genomic organization and gene regulation
Guido van Mierlo, Olga Pushkarev, Judith F. Kribelbauer, et al.
Trends in Genetics (2022) Vol. 39, Iss. 2, pp. 140-153
Open Access | Times Cited: 24

Congenital anemia reveals distinct targeting mechanisms for master transcription factor GATA1
Leif S. Ludwig, Caleb A. Lareau, Erik L. Bao, et al.
Blood (2022) Vol. 139, Iss. 16, pp. 2534-2546
Open Access | Times Cited: 23

How acidic amino acid residues facilitate DNA target site selection
Kazi Amirul Hossain, Mateusz Kogut, Joanna Słabońska, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 3
Open Access | Times Cited: 14

TFEB Transcriptional Responses Reveal Negative Feedback by BHLHE40 and BHLHE41
Kimberly L. Carey, Geraldine L. C. Paulus, Lingfei Wang, et al.
Cell Reports (2020) Vol. 33, Iss. 6, pp. 108371-108371
Open Access | Times Cited: 39

Eukaryotic gene regulation at equilibrium, or non?
Benjamin Zoller, Thomas Gregor, Gašper Tkačik
Current Opinion in Systems Biology (2022) Vol. 31, pp. 100435-100435
Open Access | Times Cited: 22

A fine kinetic balance of interactions directs transcription factor hubs to genes
Samantha Fallacaro, Apratim Mukherjee, Puttachai Ratchasanmuang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4

The method in the madness: Transcriptional control from stochastic action at the single-molecule scale
Peter H. Whitney, Timothée Lionnet
Current Opinion in Structural Biology (2024) Vol. 87, pp. 102873-102873
Open Access | Times Cited: 4

GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity and complex DNA binding of many human transcription factors
Arttu Jolma, Aldo Hernández-Corchado, Ally Yang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4

High-Throughput Affinity Measurements of Transcription Factor and DNA Mutations Reveal Affinity and Specificity Determinants
Arjun K. Aditham, Craig J. Markin, Daniel A. Mokhtari, et al.
Cell Systems (2020) Vol. 12, Iss. 2, pp. 112-127.e11
Open Access | Times Cited: 32

Context-Dependent Gene Regulation by Homeodomain Transcription Factor Complexes Revealed by Shape-Readout Deficient Proteins
Judith F. Kribelbauer, Ryan Loker, Siqian Feng, et al.
Molecular Cell (2020) Vol. 78, Iss. 1, pp. 152-167.e11
Open Access | Times Cited: 31

Flexibility of flanking DNA is a key determinant of transcription factor affinity for the core motif
Debostuti Ghoshdastidar, Manju Bansal
Biophysical Journal (2022) Vol. 121, Iss. 20, pp. 3987-4000
Open Access | Times Cited: 17

FOXP3 recognizes microsatellites and bridges DNA through multimerization
Wenxiang Zhang, Fangwei Leng, Xi Wang, et al.
Nature (2023) Vol. 624, Iss. 7991, pp. 433-441
Open Access | Times Cited: 11

Asymmetry of Motif Conservation Within Their Homotypic Pairs Distinguishes DNA-Binding Domains of Target Transcription Factors in ChIP-Seq Data
V. G. Levitsky, Vladimir V. Raditsa, A. V. Tsukanov, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 1, pp. 386-386
Open Access

Contribution of DNA breathing to physical interactions with transcription factors
W. R. BUTT, Ben Lai, Tsu-Pei Chiu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access

Scroll to top