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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Reproducible protocols for metagenomic analysis of human faecal phageomes
Andrey N. Shkoporov, Feargal J. Ryan, Lorraine A. Draper, et al.
Microbiome (2018) Vol. 6, Iss. 1
Open Access | Times Cited: 172

Showing 26-50 of 172 citing articles:

Detecting contamination in viromes using ViromeQC
Moreno Zolfo, Federica Pinto, Francesco Asnicar, et al.
Nature Biotechnology (2019) Vol. 37, Iss. 12, pp. 1408-1412
Open Access | Times Cited: 90
Bacteriophages and their potential for treatment of gastrointestinal diseases
Yi Duan, Ry Young, Bernd Schnabl
Nature Reviews Gastroenterology & Hepatology (2021) Vol. 19, Iss. 2, pp. 135-144
Open Access | Times Cited: 84
Long-read metagenomic exploration of extrachromosomal mobile genetic elements in the human gut
Yoshihiko Suzuki, Suguru Nishijima, Yoshikazu Furuta, et al.
Microbiome (2019) Vol. 7, Iss. 1
Open Access | Times Cited: 82
Individuals at risk for rheumatoid arthritis harbor differential intestinal bacteriophage communities with distinct metabolic potential
Mihnea R. Mangalea, David Páez-Espino, Kristopher Kieft, et al.
Cell Host & Microbe (2021) Vol. 29, Iss. 5, pp. 726-739.e5
Open Access | Times Cited: 82
Mouse Vendor Influence on the Bacterial and Viral Gut Composition Exceeds the Effect of Diet
Torben Sølbeck Rasmussen, Liv de Vries, Witold Kot, et al.
Viruses (2019) Vol. 11, Iss. 5, pp. 435-435
Open Access | Times Cited: 78
Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages
Aurélie Mathieu, Moïra B. Dion, Ling Deng, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 77
Gut Microbiome Signatures Are Biomarkers for Cognitive Impairment in Patients With Ischemic Stroke
Yi Ling, Tianyu Gong, Junmei Zhang, et al.
Frontiers in Aging Neuroscience (2020) Vol. 12
Open Access | Times Cited: 77
The Human Gut Phageome: Origins and Roles in the Human Gut Microbiome
Eleanor R. Townsend, Lucy Kelly, George Muscatt, et al.
Frontiers in Cellular and Infection Microbiology (2021) Vol. 11
Open Access | Times Cited: 72
Shining Light on Human Gut Bacteriophages
Emma Guerin, Colin Hill
Frontiers in Cellular and Infection Microbiology (2020) Vol. 10
Open Access | Times Cited: 71
Autochthonous faecal viral transfer (FVT) impacts the murine microbiome after antibiotic perturbation
Lorraine A. Draper, Feargal J. Ryan, Marion Dalmasso, et al.
BMC Biology (2020) Vol. 18, Iss. 1
Open Access | Times Cited: 71
Isolation and characterisation of ΦcrAss002, a crAss-like phage from the human gut that infects Bacteroides xylanisolvens
Emma Guerin, Andrey N. Shkoporov, Stephen R. Stockdale, et al.
Microbiome (2021) Vol. 9, Iss. 1
Open Access | Times Cited: 70
Gut virome profiling identifies a widespread bacteriophage family associated with metabolic syndrome
Patrick A. de Jonge, Koen Wortelboer, Torsten P. M. Scheithauer, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 66
The Age of Phage: Friend or Foe in the New Dawn of Therapeutic and Biocontrol Applications?
Ahmad Hassan, Janet Lin, Nicole Ricker, et al.
Pharmaceuticals (2021) Vol. 14, Iss. 3, pp. 199-199
Open Access | Times Cited: 65
Phages in the Gut Ecosystem
Michele Zuppi, Heather Hendrickson, Justin M. O’Sullivan, et al.
Frontiers in Cellular and Infection Microbiology (2022) Vol. 11
Open Access | Times Cited: 63
Viral biogeography of the mammalian gut and parenchymal organs
Andrey N. Shkoporov, Stephen R. Stockdale, Aonghus Lavelle, et al.
Nature Microbiology (2022) Vol. 7, Iss. 8, pp. 1301-1311
Open Access | Times Cited: 49
The human gut virome: composition, colonization, interactions, and impacts on human health
Evan Pargin, Michael J. Roach, Amber Skye, et al.
Frontiers in Microbiology (2023) Vol. 14
Open Access | Times Cited: 32
Transmission and dynamics of mother-infant gut viruses during pregnancy and early life
Sanzhima Garmaeva, Trishla Sinha, Anastasia Gulyaeva, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 16
A universe of human gut-derived bacterial prophages: unveiling the hidden viral players in intestinal microecology
Zhangming Pei, Yufei Liu, Yutao Chen, et al.
Gut Microbes (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 15
Bacteriophages, gut bacteria, and microbial pathways interplay in cardiometabolic health
Daniel Kirk, Ricardo Costeira, Alessia Visconti, et al.
Cell Reports (2024) Vol. 43, Iss. 2, pp. 113728-113728
Open Access | Times Cited: 9
A sensitivity analysis of methodological variables associated with microbiome measurements
Samuel P. Forry, Stephanie L. Servetas, Jennifer N. Dootz, et al.
Microbiology Spectrum (2025)
Open Access | Times Cited: 1
Assessing Bias and Reproducibility of Viral Metagenomics Methods for the Combined Detection of Faecal RNA and DNA Viruses
Rik Haagmans, Oliver J. Charity, David Baker, et al.
Viruses (2025) Vol. 17, Iss. 2, pp. 155-155
Open Access | Times Cited: 1
Viromics and infectivity analysis reveal the release of infective plant viruses from wastewater into the environment
Katarina Bačnik, Denis Kutnjak, Anja Pecman, et al.
Water Research (2020) Vol. 177, pp. 115628-115628
Open Access | Times Cited: 69
Challenges of Studying the Human Virome – Relevant Emerging Technologies
Mohammadali Khan Mirzaei, Jinling Xue, Rita Costa, et al.
Trends in Microbiology (2020) Vol. 29, Iss. 2, pp. 171-181
Open Access | Times Cited: 66
Probing the Mobilome: Discoveries in the Dynamic Microbiome
Victoria R. Carr, Andrey N. Shkoporov, Colin Hill, et al.
Trends in Microbiology (2020) Vol. 29, Iss. 2, pp. 158-170
Open Access | Times Cited: 63
What is (not) known about the dynamics of the human gut virome in health and disease
Leen Beller, Jelle Matthijnssens
Current Opinion in Virology (2019) Vol. 37, pp. 52-57
Open Access | Times Cited: 58

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