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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data
Liming Cai, Hongrui Zhang, Charles C. Davis
Applications in Plant Sciences (2022) Vol. 10, Iss. 3
Open Access | Times Cited: 31

Showing 1-25 of 31 citing articles:

The herbarium of the future
Charles C. Davis
Trends in Ecology & Evolution (2022) Vol. 38, Iss. 5, pp. 412-423
Open Access | Times Cited: 72
Subfamily evolution analysis using nuclear and chloroplast data from the same reads
Eranga Pawani Witharana, Takaya Iwasaki, Myat Htoo San, et al.
Scientific Reports (2025) Vol. 15, Iss. 1
Open Access | Times Cited: 1
Phylogenomic analyses re-evaluate the backbone of Corylus and unravel extensive signals of reticulate evolution
Zhen Yang, Lisong Liang, Weibo Xiang, et al.
Molecular Phylogenetics and Evolution (2025) Vol. 204, pp. 108293-108293
Closed Access | Times Cited: 1
A universal DNA barcode for the Tree of Life
Bruno A. S. de Medeiros, Liming Cai, Peter J. Flynn, et al.
(2024)
Open Access | Times Cited: 6
Mining NCBI Sequence Read Archive Database: An Untapped Source of Organelle Genomes for Taxonomic and Comparative Genomics Research
Vahap Eldem, Mehmet Ali Balcı
Diversity (2024) Vol. 16, Iss. 2, pp. 104-104
Open Access | Times Cited: 5
Snow algae exhibit diverse motile behaviors and thermal responses
Alexandre Détain, Hirono Suzuki, René H. Wijffels, et al.
mBio (2025)
Open Access
Well‐resolved phylogeny supports repeated evolution of keel flowers as a synergistic contributor to papilionoid legume diversification
Liming Cai, Domingos Cardoso, Lydia G. Tressel, et al.
New Phytologist (2025)
Closed Access
Comparative and phylogenetic analysis of the complete chloroplast genome sequences of Melanoseris cyanea group
Qian‐Qian Zhong, Zehuan Wang, Jiaju Xu, et al.
Scientific Reports (2025) Vol. 15, Iss. 1
Open Access
Genome skimming with nanopore sequencing precisely determines global and transposon DNA methylation in vertebrates
Christopher Faulk
Genome Research (2023) Vol. 33, Iss. 6, pp. 948-956
Open Access | Times Cited: 9
Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants
Alexa S. Tyszka, Eric C Bretz, Holly M. Robertson, et al.
Frontiers in Plant Science (2023) Vol. 14
Open Access | Times Cited: 7
Phylogenomics of endemic Australian Ulopinae (Hemiptera: Cicadomorpha: Cicadellidae)
Olívia Evangelista, Nikolai J. Tatarnic, Keith M. Bayless
Invertebrate Systematics (2024) Vol. 38, Iss. 2
Open Access | Times Cited: 2
All tangled up: Unraveling phylogenetics and reticulate evolution in the vining ferns, Lygodium (Schizaeales)
Jessie A. Pelosi, Bethany A. Zumwalde, Weston Testo, et al.
American Journal of Botany (2024) Vol. 111, Iss. 9
Open Access | Times Cited: 2
Well-resolved phylogeny reveals multiple origins of keel flowers during the diversification of papilionoid legumes
Liming Cai, Domingos Cardoso, Lydia G. Tressel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Phylogenomics and taxon-rich phylogenies of new and historical specimens shed light on the systematics of Hypnea (Cystocloniaceae, Rhodophyta)
Priscila Barreto de Jesus, Goia de Mattos Lyra, Hongrui Zhang, et al.
Molecular Phylogenetics and Evolution (2023) Vol. 183, pp. 107752-107752
Closed Access | Times Cited: 6
The First Complete Chloroplast Genome Sequence of Mortiño (Vaccinium floribundum) and Comparative Analyses with Other Vaccinium Species
Karla E. Rojas López, Carolina E. Armijos, Manuela Parra, et al.
Horticulturae (2023) Vol. 9, Iss. 3, pp. 302-302
Open Access | Times Cited: 5
Integrating genomic sequencing resources: an innovative perspective on recycling with universal Angiosperms353 probe sets
Xueqin Wang, Tao Xiong, Yiying Wang, et al.
Horticulture Advances (2024) Vol. 2, Iss. 1
Open Access | Times Cited: 1
Out of Place: Phylogenomics resolves the placement of Eurasian taxa and sheds light on origin of Thermopsideae in North America
Todd A. Farmer, Robert K. Jansen
Molecular Phylogenetics and Evolution (2024) Vol. 193, pp. 108024-108024
Closed Access | Times Cited: 1
A Snakemake Toolkit for the Batch Assembly, Annotation and Phylogenetic Analysis of Mitochondrial Genomes and Ribosomal Genes From Genome Skims of Museum Collections
Oliver White, Andie Hall, Benjamin Price, et al.
Molecular Ecology Resources (2024)
Open Access | Times Cited: 1
Genome Skimming with Nanopore Sequencing Precisely Determines Global and Transposon DNA Methylation in Vertebrates
Christopher Faulk
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
A snakemake toolkit for the batch assembly, annotation, and phylogenetic analysis of mitochondrial genomes and ribosomal genes from genome skims of museum collections
Oliver White, Andie Hall, Benjamin Price, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
A pipeline for assembling low copy nuclear markers from plant genome skimming data for phylogenetic use
Marcelo Reginato
PeerJ (2022) Vol. 10, pp. e14525-e14525
Open Access | Times Cited: 3
Phylogenomic Analyses Unravel the Tangled Evolutionary History of Genisteae (Fabaceae)
Sarah G. Hunter, Domingos Cardoso, Tracey A. Ruhlman, et al.
(2024)
Closed Access
Phylogenomic analyses unravel the tangled evolutionary history of Genisteae (Fabaceae)
Sarah Hunter, Domingos Cardoso, Tracey A. Ruhlman, et al.
Molecular Phylogenetics and Evolution (2024), pp. 108249-108249
Closed Access
Comparative analysis of the chloroplast genomes in abaca (Musa textilis Née) cultivars reveals low chloroplast genome variation
Rhosener Bhea L. Koh, José Planta, Jayson C. Asunto, et al.
Genetic Resources and Crop Evolution (2024) Vol. 71, Iss. 7, pp. 3613-3629
Closed Access
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