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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

ViWrap: A modular pipeline to identify, bin, classify, and predict viral–host relationships for viruses from metagenomes
Zhichao Zhou, Cody Martin, James C. Kosmopoulos, et al.
iMeta (2023) Vol. 2, Iss. 3
Open Access | Times Cited: 27

Showing 1-25 of 27 citing articles:

MicrobiomeStatPlots: Microbiome statistics plotting gallery for meta‐omics and bioinformatics
Defeng Bai, Chuang Ma, Jiani Xun, et al.
iMeta (2025)
Open Access | Times Cited: 4
Soil nutrient conditions alter viral lifestyle strategy and potential function in phosphorous and nitrogen metabolisms
Xing Huang, Zhichao Zhou, Haiyang Liu, et al.
Soil Biology and Biochemistry (2023) Vol. 189, pp. 109279-109279
Closed Access | Times Cited: 17
Viromes vs. mixed community metagenomes: choice of method dictates interpretation of viral community ecology
James C. Kosmopoulos, Katherine M. Klier, Marguerite V. Langwig, et al.
Microbiome (2024) Vol. 12, Iss. 1
Open Access | Times Cited: 7
Benchmarking informatics approaches for virus discovery: caution is needed when combining in silico identification methods
Bridget Hegarty, James A. Riddell, Eric Bastien, et al.
mSystems (2024) Vol. 9, Iss. 3
Open Access | Times Cited: 6
The multi-kingdom microbiome catalog of the chicken gastrointestinal tract
Yanan Wang, Mengqi Qu, Yuhai Bi, et al.
Biosafety and Health (2024) Vol. 6, Iss. 2, pp. 101-115
Open Access | Times Cited: 6
vClean: assessing virus sequence contamination in viral genomes
Ryota Wagatsuma, Yohei Nishikawa, Masahito Hosokawa, et al.
NAR Genomics and Bioinformatics (2025) Vol. 7, Iss. 1
Open Access
Insights into diversity, host-range, and temporal stability of Bacteroides and Phocaeicola prophages
Nejc Stopnišek, Stina Hedžet, Tomaž Accetto, et al.
BMC Microbiology (2025) Vol. 25, Iss. 1
Open Access
Biogeographic patterns and adaptive strategies of microbial carbon metabolic profiles in paddy soils in the Chinese Mollisol region
Xiaojing Hu, Haidong Gu, Mikhail Semenov, et al.
Geoderma (2025) Vol. 456, pp. 117265-117265
Open Access
ViromeFlowX: a Comprehensive Nextflow-based Automated Workflow for Mining Viral Genomes from Metagenomic Sequencing Data
Xiaokai Wang, Zhimin Ding, Ying Yang, et al.
Microbial Genomics (2024) Vol. 10, Iss. 2
Open Access | Times Cited: 2
Viromes vs. mixed community metagenomes: choice of method dictates interpretation of viral community ecology
James C. Kosmopoulos, Katherine M. Klier, Marguerite V. Langwig, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
DeepPBI-KG: a deep learning method for the prediction of phage-bacteria interactions based on key genes
Tongqing Wei, Chenqi Lu, Hanxiao Du, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 6
Open Access | Times Cited: 1
Biogeographic patterns of viral communities, ARG profiles and virus-ARG associations in adjacent paddy and upland soils across black soil region
Haidong Gu, Xiaojing Hu, Jinyuan Zhang, et al.
Journal of Hazardous Materials (2024) Vol. 485, pp. 136909-136909
Closed Access | Times Cited: 1
Phylogenetic diversity and functional potential of large and cell-associated viruses in the Bay of Bengal
Benjamin Minch, Salma Akter, Alaina Weinheimer, et al.
mSphere (2023) Vol. 8, Iss. 6
Open Access | Times Cited: 2
iVirP: An integrative, efficient, and user-friendly pipeline to annotate viral contigs from raw reads of metagenome or VLP sequencing
Bowen Li, Xianyue Jiao, Guanxiang Liang
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Active prokaryotic and eukaryotic viral ecology across spatial scale in a deep-sea brine pool
Benjamin Minch, Morgan Chakraborty, Sam J. Purkis, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Viral diversiy within marine biofilms and their potential roles in microbially influenced corrosion
Chengpeng Li, Yimeng Zhang, Shuqing Jiang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Active prokaryotic and eukaryotic viral ecology across spatial scale in a deep-sea brine pool
Benjamin Minch, Morgan Chakraborty, Sam J. Purkis, et al.
ISME Communications (2024) Vol. 4, Iss. 1
Open Access
VirID: Beyond Virus Discovery - An Integrated Platform for Comprehensive RNA Virus Characterization
Ziyue Yang, Yongtao Shan, Xue Liu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Viral diversity within marine biofilms and interactions with corrosive microbes
Chengpeng Li, Yimeng Zhang, Wen‐Qing Shi, et al.
Environmental Research (2024) Vol. 263, pp. 119991-119991
Closed Access
VirID: Beyond Virus Discovery - An Integrated Platform for Comprehensive RNA Virus Characterization
Ziyue Yang, Yongtao Shan, Xue Liu, et al.
Molecular Biology and Evolution (2024) Vol. 41, Iss. 10
Open Access
MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes
Clément Coclet, Antônio Pedro Camargo, Simon Roux
mSystems (2024) Vol. 9, Iss. 10
Open Access
CAPTVRED: An automated pipeline for viral tracking and discovery from capture-based metagenomics samples
Maria Tarradas-Alemany, Sandra Martínez‐Puchol, Cristina Mejías-Molina, et al.
Bioinformatics Advances (2024) Vol. 4, Iss. 1
Open Access
Method evaluation for viruses in activated sludge: Concentration, sequencing, and identification
Yulin Zhang, Xiawan Zheng, Weifu Yan, et al.
The Science of The Total Environment (2024) Vol. 955, pp. 176886-176886
Closed Access
Benchmarking informatics approaches for virus discovery: Caution is needed when combiningin silicoidentification methods
Bridget Hegarty, James A. Riddell, G Eric Bastien, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
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