Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Recent methodology progress of deep learning for RNA–protein interaction prediction
Xiaoyong Pan, Yang Yang, Chunqiu Xia, et al.
Wiley Interdisciplinary Reviews - RNA (2019) Vol. 10, Iss. 6
Closed Access | Times Cited: 66

Showing 1-25 of 66 citing articles:

RBPsuite: RNA-protein binding sites prediction suite based on deep learning
Xiaoyong Pan, Yi Fang, Xianfeng Li, et al.
BMC Genomics (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 71
CRBPDL: Identification of circRNA-RBP interaction sites using an ensemble neural network approach
Mengting Niu, Quan Zou, Chen Lin
PLoS Computational Biology (2022) Vol. 18, Iss. 1, pp. e1009798-e1009798
Open Access | Times Cited: 46
Prediction of RNA–protein interactions using a nucleotide language model
Keisuke Yamada, Michiaki Hamada
Bioinformatics Advances (2022) Vol. 2, Iss. 1
Open Access | Times Cited: 42
Recent trends in RNA informatics: a review of machine learning and deep learning for RNA secondary structure prediction and RNA drug discovery
Kengo Sato, Michiaki Hamada
Briefings in Bioinformatics (2023) Vol. 24, Iss. 4
Open Access | Times Cited: 40
Insulin-like growth factor 2 mRNA-binding protein 2-stabilized long non-coding RNA Taurine up-regulated gene 1 (TUG1) promotes cisplatin-resistance of colorectal cancer via modulating autophagy
Cuifeng Xia, Qiang Li, Xianshuo Cheng, et al.
Bioengineered (2022) Vol. 13, Iss. 2, pp. 2450-2469
Open Access | Times Cited: 39
RBPsuite 2.0: an updated RNA-protein binding site prediction suite with high coverage on species and proteins based on deep learning
Xiaoyong Pan, Yi Fang, Xiaojian Liu, et al.
BMC Biology (2025) Vol. 23, Iss. 1
Open Access | Times Cited: 1
Deep learning for mining protein data
Qiang Shi, Weiya Chen, Siqi Huang, et al.
Briefings in Bioinformatics (2019) Vol. 22, Iss. 1, pp. 194-218
Closed Access | Times Cited: 67
Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
Leandro Lucero, Lucía Ferrero, Camille Fonouni‐Farde, et al.
New Phytologist (2020) Vol. 229, Iss. 3, pp. 1251-1260
Open Access | Times Cited: 64
Protein–RNA interaction prediction with deep learning: structure matters
Junkang Wei, Siyuan Chen, Licheng Zong, et al.
Briefings in Bioinformatics (2021) Vol. 23, Iss. 1
Open Access | Times Cited: 53
Deep learning and ensemble deep learning for circRNA-RBP interaction prediction in the last decade: A review
Dilan Lasantha, Sugandima Vidanagamachchi, Sam Nallaperuma
Engineering Applications of Artificial Intelligence (2023) Vol. 123, pp. 106352-106352
Closed Access | Times Cited: 20
DataDTA: a multi-feature and dual-interaction aggregation framework for drug–target binding affinity prediction
Yan Zhu, Lingling Zhao, Naifeng Wen, et al.
Bioinformatics (2023) Vol. 39, Iss. 9
Open Access | Times Cited: 17
Classification and function of RNA–protein interactions
Shurong Liu, Bin Li, Qiaoxia Liang, et al.
Wiley Interdisciplinary Reviews - RNA (2020) Vol. 11, Iss. 6
Closed Access | Times Cited: 45
RPI-MDLStack: Predicting RNA–protein interactions through deep learning with stacking strategy and LASSO
Bin Yu, Xue Wang, Yaqun Zhang, et al.
Applied Soft Computing (2022) Vol. 120, pp. 108676-108676
Closed Access | Times Cited: 28
Low Glucose–Induced Overexpression of HOXC-AS3 Promotes Metabolic Reprogramming of Breast Cancer
Wenjie Zhu, Xu Chen, Xiangyu Guo, et al.
Cancer Research (2022) Vol. 82, Iss. 5, pp. 805-818
Open Access | Times Cited: 25
Deep Learning-Based Approach for Detecting DDoS Attack on Software-Defined Networking Controller
A. Mansoor, Mohammed Anbar, Abdullah Ahmed Bahashwan, et al.
Systems (2023) Vol. 11, Iss. 6, pp. 296-296
Open Access | Times Cited: 15
A systematic benchmark of machine learning methods for protein–RNA interaction prediction
Marc Horlacher, Giulia Cantini, Julian Hesse, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Open Access | Times Cited: 10
RNA BINDING PROTEINS (RBPs) ON GENETIC STABILITY AND DISEASES
Abdullahi Tunde Aborode, Ohilebo Abdulateef Abass, Shaibu Nasiru, et al.
Global Medical Genetics (2025) Vol. 12, Iss. 1, pp. 100032-100032
Open Access
Attention-augmented multi-domain cooperative graph representation learning for molecular interaction prediction
Zhaowei Wang, Jun Meng, Haibin Li, et al.
Neural Networks (2025) Vol. 186, pp. 107265-107265
Closed Access
Expression, Regulation and Function of microRNA as Important Players in the Transition of MDS to Secondary AML and Their Cross Talk to RNA-Binding Proteins
Marcus Bauer, Christoforos Vaxevanis, Nadine Heimer, et al.
International Journal of Molecular Sciences (2020) Vol. 21, Iss. 19, pp. 7140-7140
Open Access | Times Cited: 26
Recognizing binding sites of poorly characterized RNA-binding proteins on circular RNAs using attention Siamese network
Hehe Wu, Xiaoyong Pan, Yang Yang, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 6
Closed Access | Times Cited: 22
Machine learning for the discovery of molecular recognition based on single-walled carbon nanotube corona-phases
Xun Gong, Nicholas Renegar, Retsef Levi, et al.
npj Computational Materials (2022) Vol. 8, Iss. 1
Open Access | Times Cited: 16
Deciphering the Rules of Ribosome Binding Site Differentiation in Context Dependence
Yanting Duan, Xiaojuan Zhang, Weiji Zhai, et al.
ACS Synthetic Biology (2022) Vol. 11, Iss. 8, pp. 2726-2740
Closed Access | Times Cited: 16
RNA-binding protein recognition based on multi-view deep feature and multi-label learning
Haitao Yang, Zhaohong Deng, Xiaoyong Pan, et al.
Briefings in Bioinformatics (2020) Vol. 22, Iss. 3
Open Access | Times Cited: 21
Roles of Emerging RNA-Binding Activity of cGAS in Innate Antiviral Response
Yuying Ma, Xiaohui Wang, Weisheng Luo, et al.
Frontiers in Immunology (2021) Vol. 12
Open Access | Times Cited: 20
LPI-HyADBS: a hybrid framework for lncRNA-protein interaction prediction integrating feature selection and classification
Liqian Zhou, Qi Duan, Xiongfei Tian, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 19
Page 1 - Next Page

Scroll to top