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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

GeMoMa: Homology-Based Gene Prediction Utilizing Intron Position Conservation and RNA-seq Data
Jens Keilwagen, Frank Hartung, Jan Grau
Methods in molecular biology (2019), pp. 161-177
Closed Access | Times Cited: 320

Showing 1-25 of 320 citing articles:

Protein-to-genome alignment with miniprot
Heng Li
Bioinformatics (2023) Vol. 39, Iss. 1
Open Access | Times Cited: 188
Super-pangenome analyses highlight genomic diversity and structural variation across wild and cultivated tomato species
Ning Li, Qiang He, Juan Wang, et al.
Nature Genetics (2023) Vol. 55, Iss. 5, pp. 852-860
Open Access | Times Cited: 153
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics
Adam Healey, Bryan Piatkowski, John T. Lovell, et al.
Nature Plants (2023) Vol. 9, Iss. 2, pp. 238-254
Open Access | Times Cited: 47
The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars
Jarkko Salojärvi, Aditi Rambani, Zhe Yu, et al.
Nature Genetics (2024) Vol. 56, Iss. 4, pp. 721-731
Open Access | Times Cited: 39
Near telomere-to-telomere genome of the model plant Physcomitrium patens
Guiqi Bi, Shijun Zhao, Jiawei Yao, et al.
Nature Plants (2024) Vol. 10, Iss. 2, pp. 327-343
Closed Access | Times Cited: 36
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment
Xiao Ma, Steffen Vanneste, Jiyang Chang, et al.
Nature Plants (2024) Vol. 10, Iss. 2, pp. 240-255
Open Access | Times Cited: 21
Functional monocentricity with holocentric characteristics and chromosome-specific centromeres in a stick insect
William Toubiana, Zoé Dumas, Patrick Tran Van, et al.
Science Advances (2025) Vol. 11, Iss. 1
Open Access | Times Cited: 2
Brassica carinata genome characterization clarifies U’s triangle model of evolution and polyploidy in Brassica
Xiaoming Song, Yanping Wei, Dong Xiao, et al.
PLANT PHYSIOLOGY (2021) Vol. 186, Iss. 1, pp. 388-406
Open Access | Times Cited: 103
Review on the Computational Genome Annotation of Sequences Obtained by Next-Generation Sequencing
Girum Fitihamlak Ejigu, Jaehee Jung
Biology (2020) Vol. 9, Iss. 9, pp. 295-295
Open Access | Times Cited: 92
Insights into angiosperm evolution, floral development and chemical biosynthesis from the Aristolochia fimbriata genome
Liuyu Qin, Yiheng Hu, Jinpeng Wang, et al.
Nature Plants (2021) Vol. 7, Iss. 9, pp. 1239-1253
Open Access | Times Cited: 78
De novo assembly of a new Olea europaea genome accession using nanopore sequencing
Guodong Rao, Jianguo Zhang, Xiaoxia Liu, et al.
Horticulture Research (2021) Vol. 8, Iss. 1
Open Access | Times Cited: 75
bitacora: A comprehensive tool for the identification and annotation of gene families in genome assemblies
Joel Vizueta, Alejandro Sánchez‐Gracia, Julio Rozas
Molecular Ecology Resources (2020) Vol. 20, Iss. 5, pp. 1445-1452
Open Access | Times Cited: 73
A chromosome-level genome assembly of rugged rose (Rosa rugosa) provides insights into its evolution, ecology, and floral characteristics
Fei Chen, Liyao Su, Shuaiya Hu, et al.
Horticulture Research (2021) Vol. 8, Iss. 1
Open Access | Times Cited: 62
High‐quality evergreen azalea genome reveals tandem duplication‐facilitated low‐altitude adaptability and floral scent evolution
Xiuyun Wang, Yuan Gao, Xiaopei Wu, et al.
Plant Biotechnology Journal (2021) Vol. 19, Iss. 12, pp. 2544-2560
Open Access | Times Cited: 58
Chromosome‐level genome of Camellia lanceoleosa provides a valuable resource for understanding genome evolution and self‐incompatibility
Wenfang Gong, Shixin Xiao, Linkai Wang, et al.
The Plant Journal (2022) Vol. 110, Iss. 3, pp. 881-898
Closed Access | Times Cited: 56
Galba: genome annotation with miniprot and AUGUSTUS
Tomáš Brůna, Heng Li, Joseph Guhlin, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 33
Population genomics identifies genetic signatures of carrot domestication and improvement and uncovers the origin of high-carotenoid orange carrots
Kevin Coe, Hamed Bostan, William Rolling, et al.
Nature Plants (2023) Vol. 9, Iss. 10, pp. 1643-1658
Open Access | Times Cited: 31
Scaphopoda is the sister taxon to Bivalvia: Evidence of ancient incomplete lineage sorting
Hao Song, Y. P. Wang, Haojing Shao, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 40
Open Access | Times Cited: 23
Metabolite‐based genome‐wide association studies enable the dissection of the genetic bases of flavonoids, betaine and spermidine in wolfberry (Lycium)
Jianhua Zhao, Yuhui Xu, Haoxia Li, et al.
Plant Biotechnology Journal (2024) Vol. 22, Iss. 6, pp. 1435-1452
Open Access | Times Cited: 14
Genomic insights into the evolution of flavonoid biosynthesis and O-methyltransferase and glucosyltransferase in Chrysanthemum indicum
Yinai Deng, Peng Yang, Qianle Zhang, et al.
Cell Reports (2024) Vol. 43, Iss. 2, pp. 113725-113725
Open Access | Times Cited: 10
Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C
Matthew A. Field, Benjamin D. Rosen, Olga Dudchenko, et al.
GigaScience (2020) Vol. 9, Iss. 4
Open Access | Times Cited: 60
The reuse of public datasets in the life sciences: potential risks and rewards
Katharina Sielemann, Alenka Hafner, Boas Pucker
PeerJ (2020) Vol. 8, pp. e9954-e9954
Open Access | Times Cited: 54
The genome of Nautilus pompilius illuminates eye evolution and biomineralization
Yang Zhang, Fan Mao, Huawei Mu, et al.
Nature Ecology & Evolution (2021) Vol. 5, Iss. 7, pp. 927-938
Open Access | Times Cited: 54
Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family
Xupo Ding, Wen-Li Mei, Qiang Lin, et al.
GigaScience (2020) Vol. 9, Iss. 3
Open Access | Times Cited: 53
The Australian dingo is an early offshoot of modern breed dogs
Matthew A. Field, Sonu Yadav, Olga Dudchenko, et al.
Science Advances (2022) Vol. 8, Iss. 16
Open Access | Times Cited: 37
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