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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum
Xing‐Xing Shen, Dana A. Opulente, Jacek Kominek, et al.
Cell (2018) Vol. 175, Iss. 6, pp. 1533-1545.e20
Open Access | Times Cited: 531

Showing 1-25 of 531 citing articles:

Outline of Fungi and fungus-like taxa
NN Wijayawardene
Mycosphere (2020) Vol. 11, Iss. 1, pp. 1060-1456
Open Access | Times Cited: 547
A genome-scale phylogeny of the kingdom Fungi
Yuanning Li, Jacob L. Steenwyk, Ying Chang, et al.
Current Biology (2021) Vol. 31, Iss. 8, pp. 1653-1665.e5
Open Access | Times Cited: 259
Deep learning-based kcat prediction enables improved enzyme-constrained model reconstruction
Feiran Li, Le Yuan, Hongzhong Lu, et al.
Nature Catalysis (2022) Vol. 5, Iss. 8, pp. 662-672
Open Access | Times Cited: 246
Fungal diversity notes 1151–1276: taxonomic and phylogenetic contributions on genera and species of fungal taxa
Kevin D. Hyde, Yang Dong, Rungtiwa Phookamsak, et al.
Fungal Diversity (2020) Vol. 100, Iss. 1, pp. 5-277
Open Access | Times Cited: 219
Toward a Fully Resolved Fungal Tree of Life
Timothy Y. James, Jason Stajich, Chris Todd Hittinger, et al.
Annual Review of Microbiology (2020) Vol. 74, Iss. 1, pp. 291-313
Open Access | Times Cited: 210
Using PhyloSuite for molecular phylogeny and tree‐based analyses
Chuan‐Yu Xiang, Fangluan Gao, Ivan Jakovlić, et al.
iMeta (2023) Vol. 2, Iss. 1
Open Access | Times Cited: 208
Fungal taxonomy and sequence-based nomenclature
Robert Lücking, M. Catherine Aime, Barbara Robbertse, et al.
Nature Microbiology (2021) Vol. 6, Iss. 5, pp. 540-548
Open Access | Times Cited: 175
Horizontal Gene Transfer in Eukaryotes: Not if, but How Much?
Julia Van Etten, Debashish Bhattacharya
Trends in Genetics (2020) Vol. 36, Iss. 12, pp. 915-925
Open Access | Times Cited: 167
Gene gain and loss across the metazoan tree of life
Rosa Fernández, Toni Gabaldón
Nature Ecology & Evolution (2020) Vol. 4, Iss. 4, pp. 524-533
Open Access | Times Cited: 162
PhyKIT: a broadly applicable UNIX shell toolkit for processing and analyzing phylogenomic data
Jacob L. Steenwyk, Thomas J. Buida, Abigail L. LaBella, et al.
Bioinformatics (2021) Vol. 37, Iss. 16, pp. 2325-2331
Open Access | Times Cited: 152
Evolution of the human pathogenic lifestyle in fungi
Antonis Rokas
Nature Microbiology (2022) Vol. 7, Iss. 5, pp. 607-619
Open Access | Times Cited: 151
Integrative approaches for species delimitation in Ascomycota
Sajeewa S. N. Maharachchikumbura, Yanpeng Chen, Hiran A. Ariyawansa, et al.
Fungal Diversity (2021) Vol. 109, Iss. 1, pp. 155-179
Closed Access | Times Cited: 131
Incongruence in the phylogenomics era
Jacob L. Steenwyk, Yuanning Li, Xiaofan Zhou, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 12, pp. 834-850
Closed Access | Times Cited: 104
HGT is widespread in insects and contributes to male courtship in lepidopterans
Yang Li, Zhiguo Liu, Chao Liu, et al.
Cell (2022) Vol. 185, Iss. 16, pp. 2975-2987.e10
Open Access | Times Cited: 103
A genome-informed higher rank classification of the biotechnologically important fungal subphylum Saccharomycotina
Marizeth Groenewald, Chris Todd Hittinger, Konstanze Bensch, et al.
Studies in Mycology (2023) Vol. 105, Iss. 1, pp. 1-22
Open Access | Times Cited: 56
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts
Dana A. Opulente, Abigail L. LaBella, Marie‐Claire Harrison, et al.
Science (2024) Vol. 384, Iss. 6694
Open Access | Times Cited: 36
Mitochondrial ATP generation is more proteome efficient than glycolysis
Yihui Shen, Hoang V. Dinh, Edward R. Cruz, et al.
Nature Chemical Biology (2024) Vol. 20, Iss. 9, pp. 1123-1132
Closed Access | Times Cited: 35
A genomic compendium of cultivated human gut fungi characterizes the gut mycobiome and its relevance to common diseases
Qiulong Yan, Shenghui Li, Qingsong Yan, et al.
Cell (2024) Vol. 187, Iss. 12, pp. 2969-2989.e24
Closed Access | Times Cited: 35
Horizontal gene transfer in eukaryotes: aligning theory with data
Patrick J. Keeling
Nature Reviews Genetics (2024) Vol. 25, Iss. 6, pp. 416-430
Closed Access | Times Cited: 28
What are the 100 most cited fungal genera?
C.S. Bhunjun, Yijun Chen, Chayanard Phukhamsakda, et al.
Studies in Mycology (2024)
Open Access | Times Cited: 23
Macroevolutionary dynamics of gene family gain and loss along multicellular eukaryotic lineages
Mirjana Domazet-Lošo, Tin Široki, Korina Šimičević, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 17
The promise and pitfalls of synteny in phylogenomics
Jacob L. Steenwyk, Nicole King
PLoS Biology (2024) Vol. 22, Iss. 5, pp. e3002632-e3002632
Open Access | Times Cited: 17
Phylogenomic analysis of the Candida auris- Candida haemuli clade and related taxa in the Metschnikowiaceae, and proposal of thirteen new genera, fifty-five new combinations and nine new species
Fei Liu, Z-D Hu, X-M Zhao, et al.
Persoonia - Molecular Phylogeny and Evolution of Fungi (2024) Vol. 52, Iss. 1, pp. 22-43
Open Access | Times Cited: 16
A Robust Phylogenomic Time Tree for Biotechnologically and Medically Important Fungi in the Genera Aspergillus and Penicillium
Jacob L. Steenwyk, Xing‐Xing Shen, Abigail Lind, et al.
mBio (2019) Vol. 10, Iss. 4
Open Access | Times Cited: 137
Extensive loss of cell-cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts
Jacob L. Steenwyk, Dana A. Opulente, Jacek Kominek, et al.
PLoS Biology (2019) Vol. 17, Iss. 5, pp. e3000255-e3000255
Open Access | Times Cited: 125
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