OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Profiling of Pluripotency Factors in Single Cells and Early Embryos
Sarah J. Hainer, Ana Bošković, Kurtis N. McCannell, et al.
Cell (2019) Vol. 177, Iss. 5, pp. 1319-1329.e11
Open Access | Times Cited: 181

Showing 1-25 of 181 citing articles:

CUT&Tag for efficient epigenomic profiling of small samples and single cells
Hatice S Kaya-Okur, Steven J. Wu, Christine A. Codomo, et al.
Nature Communications (2019) Vol. 10, Iss. 1
Open Access | Times Cited: 1574

Improved CUT&RUN chromatin profiling tools
Michael P. Meers, Terri D. Bryson, Jorja G. Henikoff, et al.
eLife (2019) Vol. 8
Open Access | Times Cited: 405

Towards a comprehensive catalogue of validated and target-linked human enhancers
Molly Gasperini, Jacob M. Tome, Jay Shendure
Nature Reviews Genetics (2020) Vol. 21, Iss. 5, pp. 292-310
Open Access | Times Cited: 319

An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome
Chenxu Zhu, Miao Yu, Hui Huang, et al.
Nature Structural & Molecular Biology (2019) Vol. 26, Iss. 11, pp. 1063-1070
Open Access | Times Cited: 303

Efficient low-cost chromatin profiling with CUT&Tag
Hatice S Kaya-Okur, Derek H. Janssens, Jorja G. Henikoff, et al.
Nature Protocols (2020) Vol. 15, Iss. 10, pp. 3264-3283
Open Access | Times Cited: 291

Chromatin accessibility profiling by ATAC-seq
Fiorella C. Grandi, Hailey Modi, Lucas Kampman, et al.
Nature Protocols (2022) Vol. 17, Iss. 6, pp. 1518-1552
Open Access | Times Cited: 274

Joint profiling of histone modifications and transcriptome in single cells from mouse brain
Chenxu Zhu, Yanxiao Zhang, Yang Eric Li, et al.
Nature Methods (2021) Vol. 18, Iss. 3, pp. 283-292
Open Access | Times Cited: 242

The epigenetic basis of cellular heterogeneity
Benjamin C. Carter, Keji Zhao
Nature Reviews Genetics (2020) Vol. 22, Iss. 4, pp. 235-250
Open Access | Times Cited: 239

Computational methods for single-cell omics across modalities
Mirjana Efremova, Sarah A. Teichmann
Nature Methods (2020) Vol. 17, Iss. 1, pp. 14-17
Closed Access | Times Cited: 186

Methods for ChIP-seq analysis: A practical workflow and advanced applications
Ryuichiro Nakato, Toyonori Sakata
Methods (2020) Vol. 187, pp. 44-53
Open Access | Times Cited: 179

The interplay between DNA and histone methylation: molecular mechanisms and disease implications
Yinglu Li, Xiao Chen, Chao Lü
EMBO Reports (2021) Vol. 22, Iss. 5
Open Access | Times Cited: 153

Characterizing cis-regulatory elements using single-cell epigenomics
Sebastian Preißl, Kyle J. Gaulton, Bing Ren
Nature Reviews Genetics (2022) Vol. 24, Iss. 1, pp. 21-43
Closed Access | Times Cited: 149

Single-cell transcriptome atlas of the leaf and root of rice seedlings
Yu Wang, Qing Huan, Ke Li, et al.
Journal of genetics and genomics/Journal of Genetics and Genomics (2021) Vol. 48, Iss. 10, pp. 881-898
Open Access | Times Cited: 141

Chromatin accessibility profiling methods
Liesbeth Minnoye, Georgi K. Marinov, Thomas Krausgruber, et al.
Nature Reviews Methods Primers (2021) Vol. 1, Iss. 1
Open Access | Times Cited: 135

Single cell cancer epigenetics
Marta Casado-Peláez, Alberto Bueno-Costa, Manel Esteller
Trends in cancer (2022) Vol. 8, Iss. 10, pp. 820-838
Open Access | Times Cited: 77

The Role and Activity of SWI/SNF Chromatin Remodelers
Tomasz Bieluszewski, Sandhan Prakash, Thomas Roulé, et al.
Annual Review of Plant Biology (2023) Vol. 74, Iss. 1, pp. 139-163
Open Access | Times Cited: 49

The BAF chromatin remodeler synergizes with RNA polymerase II and transcription factors to evict nucleosomes
Sandipan Brahma, Steven Henikoff
Nature Genetics (2023) Vol. 56, Iss. 1, pp. 100-111
Open Access | Times Cited: 43

Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet
Coby Viner, Charles A. Ishak, James Johnson, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 19

Bidirectional histone monoaminylation dynamics regulate neural rhythmicity
Qingfei Zheng, Benjamin H. Weekley, David A. Vinson, et al.
Nature (2025)
Open Access | Times Cited: 4

Gene regulatory programmes of tissue regeneration
Joseph Goldman, Kenneth D. Poss
Nature Reviews Genetics (2020) Vol. 21, Iss. 9, pp. 511-525
Open Access | Times Cited: 135

Profiling chromatin states using single-cell itChIP-seq
Shanshan Ai, Haiqing Xiong, Chen C. Li, et al.
Nature Cell Biology (2019) Vol. 21, Iss. 9, pp. 1164-1172
Closed Access | Times Cited: 128

High‐Resolution Chromatin Profiling Using CUT&RUN
Sarah J. Hainer, Thomas G. Fazzio
Current Protocols in Molecular Biology (2019) Vol. 126, Iss. 1
Open Access | Times Cited: 99

Genomic methods in profiling DNA accessibility and factor localization
David C. Klein, Sarah J. Hainer
Chromosome Research (2019) Vol. 28, Iss. 1, pp. 69-85
Open Access | Times Cited: 92

Simultaneous profiling of multiple chromatin proteins in the same cells
Sneha Gopalan, Yuqing Wang, Nicholas W. Harper, et al.
Molecular Cell (2021) Vol. 81, Iss. 22, pp. 4736-4746.e5
Open Access | Times Cited: 91

Maternal vitamin C regulates reprogramming of DNA methylation and germline development
Stephanie DiTroia, Michelle Percharde, Marie-Justine Guerquin, et al.
Nature (2019) Vol. 573, Iss. 7773, pp. 271-275
Open Access | Times Cited: 89

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