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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Single-cell ATAC sequencing analysis: From data preprocessing to hypothesis generation
Seungbyn Baek, Insuk Lee
Computational and Structural Biotechnology Journal (2020) Vol. 18, pp. 1429-1439
Open Access | Times Cited: 128

Showing 1-25 of 128 citing articles:

Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 513
Human disease models in drug development
Anna Loewa, James J. Feng, Sarah Hedtrich
Nature Reviews Bioengineering (2023) Vol. 1, Iss. 8, pp. 545-559
Open Access | Times Cited: 139
Chromatin accessibility profiling methods
Liesbeth Minnoye, Georgi K. Marinov, Thomas Krausgruber, et al.
Nature Reviews Methods Primers (2021) Vol. 1, Iss. 1
Open Access | Times Cited: 135
Single-cell immunology: Past, present, and future
Florent Ginhoux, Adam Yalin, Charles‐Antoine Dutertre, et al.
Immunity (2022) Vol. 55, Iss. 3, pp. 393-404
Open Access | Times Cited: 71
scAAGA: Single cell data analysis framework using asymmetric autoencoder with gene attention
Rui Meng, Shuaidong Yin, Jianqiang Sun, et al.
Computers in Biology and Medicine (2023) Vol. 165, pp. 107414-107414
Closed Access | Times Cited: 68
Deep learning applications in single-cell genomics and transcriptomics data analysis
Nafiseh Erfanian, A. Ali Heydari, Adib Miraki Feriz, et al.
Biomedicine & Pharmacotherapy (2023) Vol. 165, pp. 115077-115077
Open Access | Times Cited: 58
A fast, scalable and versatile tool for analysis of single-cell omics data
Kai Zhang, Nathan R. Zemke, Ethan J. Armand, et al.
Nature Methods (2024) Vol. 21, Iss. 2, pp. 217-227
Open Access | Times Cited: 45
‘Multi-omics’ data integration: applications in probiotics studies
Iliya Dauda Kwoji, Olayinka Ayobami Aiyegoro, Moses Okpeku, et al.
npj Science of Food (2023) Vol. 7, Iss. 1
Open Access | Times Cited: 44
Understanding tumour cell heterogeneity and its implication for immunotherapy in liver cancer using single-cell analysis
S. Heinrich, Amanda J. Craig, Lichun Ma, et al.
Journal of Hepatology (2020) Vol. 74, Iss. 3, pp. 700-715
Closed Access | Times Cited: 75
Contemporary perspectives on heterotopic ossification
Charles Hwang, Chase A. Pagani, Johanna Nunez, et al.
JCI Insight (2022) Vol. 7, Iss. 14
Open Access | Times Cited: 60
Bibliometric review of ATAC-Seq and its application in gene expression
Li-Heng Luo, Michael Gribskov, Sufang Wang
Briefings in Bioinformatics (2022) Vol. 23, Iss. 3
Open Access | Times Cited: 44
Multimodal single-cell datasets characterize antigen-specific CD8+ T cells across SARS-CoV-2 vaccination and infection
Bingjie Zhang, Rabi Upadhyay, Yuhan Hao, et al.
Nature Immunology (2023) Vol. 24, Iss. 10, pp. 1725-1734
Open Access | Times Cited: 28
Cellcano: supervised cell type identification for single cell ATAC-seq data
Wenjing Ma, Jiaying Lu, Hao Wu
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 25
Deep learning in spatially resolved transcriptomics: a comprehensive technical view
Roxana Zahedi, Mohammad Reza Eftekhariyan Ghamsari, Ahmadreza Argha, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 15
Epigenomic heterogeneity as a source of tumour evolution
Marthe Laisné, Mathieu Lupien, Céline Vallot
Nature reviews. Cancer (2024)
Closed Access | Times Cited: 9
AgeAnno: a knowledgebase of single-cell annotation of aging in human
Kexin Huang, Hoaran Gong, Jingjing Guan, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D805-D815
Open Access | Times Cited: 29
Artificial intelligence-driven biomedical genomics
Kairui Guo, Mengjia Wu, Zelia Soo, et al.
Knowledge-Based Systems (2023) Vol. 279, pp. 110937-110937
Open Access | Times Cited: 22
Epigenetic remodeling of the immune landscape in cancer: therapeutic hurdles and opportunities
Feng‐Ming Tien, Hsuan‐Hsuan Lu, Shu‐Yung Lin, et al.
Journal of Biomedical Science (2023) Vol. 30, Iss. 1
Open Access | Times Cited: 21
scCASE: accurate and interpretable enhancement for single-cell chromatin accessibility sequencing data
Songming Tang, Xuejian Cui, Rongxiang Wang, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 7
B-Cell Receptor Repertoire: Recent Advances in Autoimmune Diseases
Qian Wang, Delong Feng, Sujie Jia, et al.
Clinical Reviews in Allergy & Immunology (2024) Vol. 66, Iss. 1, pp. 76-98
Closed Access | Times Cited: 7
Single-cell multiomics decodes regulatory programs for mouse secondary palate development
Fangfang Yan, Akiko Suzuki, Chihiro Iwaya, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 6
Transcription factor chromatin profiling genome-wide using uliCUT&RUN in single cells and individual blastocysts
Benjamin J. Patty, Sarah J. Hainer
Nature Protocols (2021) Vol. 16, Iss. 5, pp. 2633-2666
Open Access | Times Cited: 35
Intricacies of single-cell multi-omics data integration
Pia Rautenstrauch, Anna Hendrika Cornelia Vlot, Sepideh Saran, et al.
Trends in Genetics (2021) Vol. 38, Iss. 2, pp. 128-139
Closed Access | Times Cited: 35
Single-cell RNA sequencing in skeletal muscle developmental biology
Cuicui Cai, Yuan Yue, Binglin Yue
Biomedicine & Pharmacotherapy (2023) Vol. 162, pp. 114631-114631
Open Access | Times Cited: 16
Whole genome deconvolution unveils Alzheimer’s resilient epigenetic signature
Eloïse Berson, Anjali Sreenivas, Thanaphong Phongpreecha, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 15
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