OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Guided extraction of genome-scale metabolic models for the integration and analysis of omics data
Andrew Walakira, Damjana Rozman, Tadeja Režen, et al.
Computational and Structural Biotechnology Journal (2021) Vol. 19, pp. 3521-3530
Open Access | Times Cited: 21

Showing 21 citing articles:

Recent advances in machine learning applications in metabolic engineering
Pradipta Patra, Disha B.R., Pritam Kundu, et al.
Biotechnology Advances (2022) Vol. 62, pp. 108069-108069
Closed Access | Times Cited: 52

Context-Specific Genome-Scale Metabolic Modelling and Its Application to the Analysis of COVID-19 Metabolic Signatures
Miha Moškon, Tadeja Režen
Metabolites (2023) Vol. 13, Iss. 1, pp. 126-126
Open Access | Times Cited: 13

Machine learning for the advancement of genome-scale metabolic modeling
Pritam Kundu, Satyajit Beura, Suman Mondal, et al.
Biotechnology Advances (2024) Vol. 74, pp. 108400-108400
Closed Access | Times Cited: 5

How reliable are Chinese hamster ovary (CHO) cell genome‐scale metabolic models?
Benjamin Strain, James Morrissey, Athanasios Antonakoudis, et al.
Biotechnology and Bioengineering (2023) Vol. 120, Iss. 9, pp. 2460-2478
Open Access | Times Cited: 11

Integrative computational modeling to unravel novel potential biomarkers in hepatocellular carcinoma
Andrew Walakira, Cene Skubic, Nejc Nadižar, et al.
Computers in Biology and Medicine (2023) Vol. 159, pp. 106957-106957
Open Access | Times Cited: 11

Bridging the gap in precision medicine: TranSYS training programme for next-generation scientists
Lara Andreoli, Catalina Berca, Sonja Katz, et al.
Frontiers in Medicine (2024) Vol. 11
Open Access | Times Cited: 3

Optimizing VLP production in gene therapy: Opportunities and challenges for in silico modeling
Leopold Zehetner, Diana Széliová, Barbara Kraus, et al.
Biotechnology Journal (2023) Vol. 18, Iss. 7
Open Access | Times Cited: 7

Genome-scale metabolic models in translational medicine: the current status and potential of machine learning in improving the effectiveness of the models
Beste Turanlı, Gizem Gülfidan, Ozge Onluturk Aydogan, et al.
Molecular Omics (2024) Vol. 20, Iss. 4, pp. 234-247
Closed Access | Times Cited: 2

Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models
Tadeja Režen, Alexandre Martins, Miha Mraz, et al.
Computers in Biology and Medicine (2022) Vol. 145, pp. 105428-105428
Open Access | Times Cited: 9

State-of the-Art Constraint-Based Modeling of Microbial Metabolism: From Basics to Context-Specific Models with a Focus on Methanotrophs
Mikhail A. Kulyashov, Semyon Kolmykov, Т. М. Хлебодарова, et al.
Microorganisms (2023) Vol. 11, Iss. 12, pp. 2987-2987
Open Access | Times Cited: 4

Comparative Proteomics Highlights that GenX Exposure Leads to Metabolic Defects and Inflammation in Astrocytes
Abdulla Abu-Salah, Müberra Fatma Cesur, Aiesha Anchan, et al.
Environmental Science & Technology (2024) Vol. 58, Iss. 46, pp. 20525-20539
Open Access | Times Cited: 1

Protocol for hybrid flux balance, statistical, and machine learning analysis of multi-omic data from the cyanobacterium Synechococcus sp. PCC 7002
Supreeta Vijayakumar, Claudio Angione
STAR Protocols (2021) Vol. 2, Iss. 4, pp. 100837-100837
Open Access | Times Cited: 8

Emerging computational paradigms to address the complex role of gut microbial metabolism in cardiovascular diseases
Javad Aminian-Dehkordi, Amin Valiei, Mohammad R. K. Mofrad
Frontiers in Cardiovascular Medicine (2022) Vol. 9
Open Access | Times Cited: 5

Fuzzy optimization for identifying anti-cancer targets with few side effects in constraint-based models of head and neck cancer
Feng‐Sheng Wang, Peirong Chen, Ting‐Yu Chen, et al.
Royal Society Open Science (2022) Vol. 9, Iss. 10
Open Access | Times Cited: 4

Modification and Analysis of Context-Specific Genome-Scale Metabolic Models: Methane-Utilizing Microbial Chassis as a Case Study
Mikhail A. Kulyashov, Richard Hamilton, Y. Afshin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

Integration and Analysis of Omics Data Using Genome-Scale Metabolic Models
Miha Moškon, Tadeja Režen
Metabolites (2024) Vol. 14, Iss. 11, pp. 595-595
Open Access

Genome-Scale Metabolic Modeling for Disease
Tunahan Çakır, Ecehan Abdi̇k, Dilara Uzuner, et al.
Elsevier eBooks (2024)
Closed Access

Systems Metabolic Engineering of Corynebacterium glutamicum to Create a Producer of L-Valine
M. E. Sheremetieva, Т. М. Хлебодарова, Д. Д. Дербиков, et al.
Applied Biochemistry and Microbiology (2024) Vol. 60, Iss. 9, pp. 1603-1622
Closed Access

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