OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Bacterial species identification using MALDI-TOF mass spectrometry and machine learning techniques: A large-scale benchmarking study
Thomas Mortier, Anneleen D. Wieme, Peter Vandamme, et al.
Computational and Structural Biotechnology Journal (2021) Vol. 19, pp. 6157-6168
Open Access | Times Cited: 51

Showing 1-25 of 51 citing articles:

Towards the fully automated monitoring of ecological communities
Marc Besson, Jamie Alison, Kim Bjerge, et al.
Ecology Letters (2022) Vol. 25, Iss. 12, pp. 2753-2775
Open Access | Times Cited: 153

Recent Developments in Machine Learning for Mass Spectrometry
Armen G. Beck, Matthew Muhoberac, Caitlin E. Randolph, et al.
ACS Measurement Science Au (2024) Vol. 4, Iss. 3, pp. 233-246
Open Access | Times Cited: 19

A MALDI-ToF mass spectrometry database for identification and classification of highly pathogenic bacteria
Peter Lasch, Wolfgang Beyer, Alejandra Bosch, et al.
Scientific Data (2025) Vol. 12, Iss. 1
Open Access | Times Cited: 1

Rapid species differentiation and typing of Acinetobacter baumannii

German Journal of Veterinary Research (2024) Vol. 4, Iss. 3, pp. 37-48
Open Access | Times Cited: 8

Machine learning and matrix-assisted laser desorption/ionization time-of-flight mass spectra for antimicrobial resistance prediction: A systematic review of recent advancements and future development
Xaviera A. López-Cortés, José M. Manríquez-Troncoso, John Kandalaft-Letelier, et al.
Journal of Chromatography A (2024) Vol. 1734, pp. 465262-465262
Closed Access | Times Cited: 6

MALDI sample preparation methods: A mini review
Avinash A. Patil, Mhikee Janella N. Descanzo, Vaishnavi B. Dhisale, et al.
International Journal of Mass Spectrometry (2024) Vol. 498, pp. 117219-117219
Closed Access | Times Cited: 5

Efficiently Predicting Vancomycin Resistance of Enterococcus Faecium From MALDI-TOF MS Spectra Using a Deep Learning-Based Approach
Hsin‐Yao Wang, Tsung-Ting Hsieh, Chia‐Ru Chung, et al.
Frontiers in Microbiology (2022) Vol. 13
Open Access | Times Cited: 21

“Omic” Approaches to Bacteria and Antibiotic Resistance Identification
Daria Janiszewska, Małgorzata Szultka‐Młyńska, Paweł Pomastowski, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 17, pp. 9601-9601
Open Access | Times Cited: 20

Harnessing deep learning for faster water quality assessment: identifying bacterial contaminants in real time
Fahad Ahmed Khokhar, Jamal Hussain Shah, Rabia Saleem, et al.
The Visual Computer (2024) Vol. 41, Iss. 2, pp. 1037-1048
Open Access | Times Cited: 4

End-To-End Deep Learning Explains Antimicrobial Resistance in Peak-Picking-Free MALDI-MS Data
Johan K. Lassen, Palle Villesen
Analytical Chemistry (2025)
Closed Access

Typing Brucella Species by MALDI-TOF Mass Spectrometry Combined with Machine Learning
Hua Cai, Guizhen Wang, Yuzhen Bai, et al.
Journal of Analysis and Testing (2025)
Closed Access

First Case Report of Successful Treatment of Mycobacterium abscessus Infection in a Cat in Thailand
Thapanee Chuenngam, Suttiwee Chermprapai
Animals (2025) Vol. 15, Iss. 7, pp. 925-925
Open Access

Machine Learning-Enhanced MALDI-TOF MS for Real-Time Detection of Antibiotic-Resistant E. coli in Food Processing
Hong‐Ting Victor Lin, Tien-Nan Yang, Wen-Jung Lu, et al.
LWT (2025), pp. 117860-117860
Open Access

Enabling next-generation anaerobic cultivation through biotechnology to advance functional microbiome research
Thomas Clavel, Franziska Faber, Mathieu Groussin, et al.
Nature Biotechnology (2025)
Closed Access

Pre-trained Maldi Transformers improve MALDI-TOF MS-based prediction
Gaetan De Waele, Gerben Menschaert, Peter Vandamme, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3

Pre-trained Maldi Transformers improve MALDI-TOF MS-based prediction
Gaetan De Waele, Gerben Menschaert, Peter Vandamme, et al.
Computers in Biology and Medicine (2025) Vol. 186, pp. 109695-109695
Open Access

Definition and strategy of intelligent foodomics for diagnosis and identification of hazards and pathogens in food-borne diseases
Dangang Shangguan, Yuanliang Wang, Qi Huang, et al.
Trends in Food Science & Technology (2025), pp. 104994-104994
Closed Access

Identification of Escherichia coli strains using MALDI-TOF MS combined with long short-term memory neural networks
Qiqi Mao, Xie Zhang, Zeping Xu, et al.
Aging (2024) Vol. 16, Iss. 13, pp. 11018-11026
Open Access | Times Cited: 2

Rapid Classification and Differentiation of Sepsis-Related Pathogens Using FT-IR Spectroscopy
Shwan Ahmed, Jawaher Albahri, Sahand Shams, et al.
Microorganisms (2024) Vol. 12, Iss. 7, pp. 1415-1415
Open Access | Times Cited: 2

Multi-label classification to predict antibiotic resistance from raw clinical MALDI-TOF mass spectrometry data
César A. Astudillo, Xaviera A. López-Cortés, Elias Ocque, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 2

An antimicrobial drug recommender system using MALDI-TOF MS and dual-branch neural networks
Gaetan De Waele, Gerben Menschaert, Willem Waegeman
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4

Lipidomics Characterization of the Microbiome in People with Diabetic Foot Infection Using MALDI-TOF MS
Justyna Walczak‐Skierska, Fernanda Monedeiro, Ewelina Maślak, et al.
Analytical Chemistry (2023) Vol. 95, Iss. 44, pp. 16251-16262
Open Access | Times Cited: 4

Susceptibility of some Enterobacteriaceae isolated from 4 different aquatic environments in DR Congo (Central Africa), to Amoxicillin/Clavulanic acid and some 3rd generation Cephalosporins
Mwanzo Wavindu, Edith Brunelle Mouafo Tamnou, Ildephonse Soly Kamwira, et al.
GSC Biological and Pharmaceutical Sciences (2024) Vol. 26, Iss. 1, pp. 178-190
Open Access | Times Cited: 1

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