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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

ADH-PPI: An attention-based deep hybrid model for protein-protein interaction prediction
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Muhammad Imran Malik, et al.
iScience (2022) Vol. 25, Iss. 10, pp. 105169-105169
Open Access | Times Cited: 20

Showing 20 citing articles:

Recent Advances in Deep Learning for Protein-Protein Interaction Analysis: A Comprehensive Review
Minhyeok Lee
Molecules (2023) Vol. 28, Iss. 13, pp. 5169-5169
Open Access | Times Cited: 39
ADH-Enhancer: an attention-based deep hybrid framework for enhancer identification and strength prediction
Faiza Mehmood, Shazia Arshad, Muhammad Shoaib
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 12
GNNGL-PPI: multi-category prediction of protein-protein interactions using graph neural networks based on global graphs and local subgraphs
Xin Zeng, Fanfang Meng, Meng‐Liang Wen, et al.
BMC Genomics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 5
ProBAN: Neural network algorithm for predicting binding affinity in protein–protein complexes
Elizaveta Alexandrovna Bogdanova, Valery Novoseletsky
Proteins Structure Function and Bioinformatics (2024) Vol. 92, Iss. 9, pp. 1127-1136
Closed Access | Times Cited: 4
RNA Sequence Analysis Landscape: A Comprehensive Review of Task Types, Databases, Datasets, Word Embedding Methods, and Language Models
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Tayyaba Asif, et al.
Heliyon (2025) Vol. 11, Iss. 2, pp. e41488-e41488
Open Access
Peptide classification landscape: An in-depth systematic literature review on peptide types, databases, datasets, predictors architectures and performance
Muhammad Nabeel Asim, Tayyaba Asif, Faiza Mehmood, et al.
Computers in Biology and Medicine (2025) Vol. 188, pp. 109821-109821
Closed Access
Compact Artificial Neural Network Models for Predicting Protein Residue - RNA Base Binding
Stanislav Selitskiy
Lecture notes in computer science (2025), pp. 145-159
Closed Access
LPBERT: A Protein–Protein Interaction Prediction Method Based on a Pre-Trained Language Model
An Hu, Linai Kuang, Dinghai Yang
Applied Sciences (2025) Vol. 15, Iss. 6, pp. 3283-3283
Open Access
A Local–Global Graph KAN for Multi‐Class Prediction of PPI
Minghui Liu, Ying Qu
Engineering Reports (2025) Vol. 7, Iss. 5
Open Access
Long extrachromosomal circular DNA identification by fusing sequence-derived features of physicochemical properties and nucleotide distribution patterns
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Sheraz Ahmed, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 3
The power of computational proteomics platforms to decipher protein-protein interactions
Mariela González‐Avendaño, Joaquín López, Ariela Vergara‐Jaque, et al.
Current Opinion in Structural Biology (2024) Vol. 88, pp. 102882-102882
Closed Access | Times Cited: 3
Studying protein–protein interactions: Latest and most popular approaches
Sama Akbarzadeh, Özlem Coşkun, Başak Günçer
Journal of Structural Biology (2024) Vol. 216, Iss. 4, pp. 108118-108118
Closed Access | Times Cited: 3
State‐of‐the‐art computational methods to predict protein–protein interactions with high accuracy and coverage
Neal Kewalramani, Andrew Emili, Mark Crovella
PROTEOMICS (2023) Vol. 23, Iss. 21-22
Open Access | Times Cited: 8
RPPSP: A Robust and Precise Protein Solubility Predictor by Utilizing Novel Protein Sequence Encoder
Faiza Mehmood, Shazia Arshad, Muhammad Shoaib
IEEE Access (2023) Vol. 11, pp. 59397-59416
Open Access | Times Cited: 7
Deep Learning Methods for Binding Site Prediction in Protein Structures
Elizaveta Geraseva
Biochemistry (Moscow) Supplement Series B Biomedical Chemistry (2024) Vol. 18, Iss. 2, pp. 103-117
Closed Access | Times Cited: 1
Binding Affinity Prediction in Protein-Protein Complexes Using Convolutional Neural Network
Elizaveta Alexandrovna Bogdanova, Valery Novoseletsky, К. В. Шайтан
Studies in computational intelligence (2023), pp. 389-397
Closed Access | Times Cited: 2
Pre-trained Language Models for Decoding Protein Language: a Survey
Maheera Amjad, Ayesha Munir, Usman Zia, et al.
(2024), pp. 1-12
Closed Access
Protein-protein interaction detection using deep learning: A survey, comparative analysis, and experimental evaluation
Kamal Taha
Computers in Biology and Medicine (2024) Vol. 185, pp. 109449-109449
Open Access
RPCP-PURI: A robust and precise computational predictor for Phishing Uniform Resource Identification
Tayyaba Asif, Faiza Mehmood, Syed Ahmed Mazhar Gillani, et al.
Journal of Information Security and Applications (2024) Vol. 89, pp. 103953-103953
Closed Access
iLEC-DNA: Identifying Long Extra-chromosomal Circular DNA by Fusing Sequence-derived Features of Physicochemical Properties and Nucleotide Distribution Patterns
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
iLEC-DNA: Identifying Long Extra-chromosomal Circular DNA by Fusing Sequence-derived Features of Physicochemical Properties and Nucleotide Distribution Patterns
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel, et al.
Research Square (Research Square) (2023)
Open Access
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