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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Recommendations for the introduction of metagenomic next-generation sequencing in clinical virology, part II: bioinformatic analysis and reporting
Jutte J.C. de Vries, Julianne R. Brown, Natacha Couto, et al.
Journal of Clinical Virology (2021) Vol. 138, pp. 104812-104812
Open Access | Times Cited: 63

Showing 1-25 of 63 citing articles:

Agnostic Sequencing for Detection of Viral Pathogens
Nick P. G. Gauthier, Samuel D. Chorlton, Mel Krajden, et al.
Clinical Microbiology Reviews (2023) Vol. 36, Iss. 1
Open Access | Times Cited: 27
Intermediate Uveitis: An Updated Review of the Differential Diagnosis and Relevant Special Investigations
J Mark, Derrick P. Smit, E Rajashree, et al.
Ocular Immunology and Inflammation (2025), pp. 1-13
Open Access | Times Cited: 1
Safety and Diagnostic Utility of Brain Biopsy and Metagenomics in Decision-Making for Patients with Inborn Errors of Immunity (IEI) and Unexplained Neurological Manifestations
Jesmeen Maimaris, Julia L. Payne, Adriel Roa-Bautista, et al.
Journal of Clinical Immunology (2025) Vol. 45, Iss. 1
Open Access | Times Cited: 1
Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples
Jutte J.C. de Vries, Julianne R. Brown, Nicole Fischer, et al.
Journal of Clinical Virology (2021) Vol. 141, pp. 104908-104908
Open Access | Times Cited: 50
An update on current and novel molecular diagnostics for the diagnosis of invasive fungal infections
Jeffrey D. Jenks, P. Lewis White, Sarah Kidd, et al.
Expert Review of Molecular Diagnostics (2023) Vol. 23, Iss. 12, pp. 1135-1152
Closed Access | Times Cited: 19
Utilizing Metagenomic Next-Generation Sequencing (mNGS) for Rapid Pathogen Identification and to Inform Clinical Decision-Making: Results from a Large Real-World Cohort
Jie Xu, Peng Zhou, Jia Liu, et al.
Infectious Diseases and Therapy (2023) Vol. 12, Iss. 4, pp. 1175-1187
Open Access | Times Cited: 17
Enhancing Clinical Utility: Utilization of International Standards and Guidelines for Metagenomic Sequencing in Infectious Disease Diagnosis
Chau-Ming Kan, Hin Fung Tsang, Xiao M. Pei, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 6, pp. 3333-3333
Open Access | Times Cited: 6
Virion-Associated Nucleic Acid-Based Metagenomics: A Decade of Advances in Molecular Characterization of Plant Viruses
Oumaima Moubset, Sarah François, François Maclot, et al.
Phytopathology (2022) Vol. 112, Iss. 11, pp. 2253-2272
Open Access | Times Cited: 24
Comparison of the performance of two targeted metagenomic virus capture probe-based methods using reference control materials and clinical samples
Kees Mourik, Igor A. Sidorov, Ellen C. Carbo, et al.
Journal of Clinical Microbiology (2024) Vol. 62, Iss. 6
Closed Access | Times Cited: 6
Evaluation of extraction and enrichment methods for recovery of respiratory RNA viruses in a metagenomics approach
Ayodeji Ogunbayo, Saheed Sabiu, Martin M. Nyaga
Journal of Virological Methods (2023) Vol. 314, pp. 114677-114677
Open Access | Times Cited: 13
Hybrid capture shotgun sequencing detected unexpected viruses in the cerebrospinal fluid of children with acute meningitis and encephalitis
Cristian Launes, Juan Gérvas Camacho, Marina Pons‐Espinal, et al.
European Journal of Clinical Microbiology & Infectious Diseases (2024) Vol. 43, Iss. 5, pp. 863-873
Open Access | Times Cited: 4
INSaFLU-TELEVIR: an open web-based bioinformatics suite for viral metagenomic detection and routine genomic surveillance
João Dourado Santos, Daniel Sobral, Miguel Pinheiro, et al.
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 4
Future potential of metagenomics in microbiology laboratories
Leonard Schuele, Hayley Cassidy, Nilay Peker, et al.
Expert Review of Molecular Diagnostics (2021) Vol. 21, Iss. 12, pp. 1273-1285
Open Access | Times Cited: 24
De novo identification of microbial contaminants in low microbial biomass microbiomes with Squeegee
Yunxi Liu, R. A. Leo Elworth, Michael D. Jochum, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 19
Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery
Philippe Pérot, Thomas Bigot, Sarah Temmam, et al.
Viruses (2022) Vol. 14, Iss. 9, pp. 1990-1990
Open Access | Times Cited: 17
Assessing the Quality of Metagenomic Next-Generation Sequencing for Pathogen Detection in Lower Respiratory Infections
Zhenli Diao, Yuanfeng Zhang, Yuqing Chen, et al.
Clinical Chemistry (2023) Vol. 69, Iss. 9, pp. 1038-1049
Closed Access | Times Cited: 10
Untargeted metagenomics protocol for the diagnosis of infection from CSF and tissue from sterile sites
Laura Atkinson, Jack C. D. Lee, Alexander Lennon, et al.
Heliyon (2023) Vol. 9, Iss. 9, pp. e19854-e19854
Open Access | Times Cited: 10
The added value of metagenomic next-generation sequencing in central nervous system infections: a systematic review of case reports
Kira Waagner Birkeland, Laurence Mostert, Eric C. J. Claas, et al.
Infection (2025)
Open Access
The use of metagenomics to enhance diagnosis of Encephalitis
Sarah Buddle, Oscar Walter Torres, Sofia Morfopoulou, et al.
Expert Review of Molecular Diagnostics (2025)
Closed Access
Metagenomics characterization of respiratory viral RNA pathogens in children under five years with severe acute respiratory infection in the Free State, South Africa
Ayodeji Ogunbayo, Milton T. Mogotsi, Hlengiwe Sondlane, et al.
Journal of Medical Virology (2023) Vol. 95, Iss. 5
Open Access | Times Cited: 9
Viral metagenomic sequencing in the diagnosis of meningoencephalitis: a review of technical advances and diagnostic yield
Ellen C. Carbo, Ivar Blankenspoor, Jelle J. Goeman, et al.
Expert Review of Molecular Diagnostics (2021) Vol. 21, Iss. 11, pp. 1139-1146
Open Access | Times Cited: 19
Optimization of cerebrospinal fluid microbial DNA metagenomic sequencing diagnostics
Josefin Olausson, Sofia Brunet, Diana Vracar, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 14
How Metagenomics Has Transformed Our Understanding of Bacteriophages in Microbiome Research
Laura K. Inglis, Robert A. Edwards
Microorganisms (2022) Vol. 10, Iss. 8, pp. 1671-1671
Open Access | Times Cited: 14
A case for investment in clinical metagenomics in low-income and middle-income countries
Gert Marais, Diana Hardie, Adrian Brink
The Lancet Microbe (2022) Vol. 4, Iss. 3, pp. e192-e199
Open Access | Times Cited: 14
Shotgun metagenomics to investigate unknown viral etiologies of pediatric meningoencephalitis
Andrea Castellot, Juan Pedro M. Camacho, María Dolores Fernández-García, et al.
PLoS ONE (2023) Vol. 18, Iss. 12, pp. e0296036-e0296036
Open Access | Times Cited: 7
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