Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples
Jutte J.C. de Vries, Julianne R. Brown, Nicole Fischer, et al.
Journal of Clinical Virology (2021) Vol. 141, pp. 104908-104908
Open Access | Times Cited: 50

Showing 1-25 of 50 citing articles:

Detection of enterovirus RNA in pancreas and lymphoid tissues of organ donors with type 1 diabetes
Jutta E. Laiho, Sami Oikarinen, Sofia Morfopoulou, et al.
Diabetologia (2025)
Open Access | Times Cited: 2
Combination of Whole Genome Sequencing and Metagenomics for Microbiological Diagnostics
Srinithi Purushothaman, Marco Meola, Adrian Egli
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 17, pp. 9834-9834
Open Access | Times Cited: 51
Agnostic Sequencing for Detection of Viral Pathogens
Nick P. G. Gauthier, Samuel D. Chorlton, Mel Krajden, et al.
Clinical Microbiology Reviews (2023) Vol. 36, Iss. 1
Open Access | Times Cited: 27
Benchmarking bioinformatic virus identification tools using real-world metagenomic data across biomes
Ling-Yi Wu, Yasas Wijesekara, Gonçalo J. Piedade, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 15
Safety and Diagnostic Utility of Brain Biopsy and Metagenomics in Decision-Making for Patients with Inborn Errors of Immunity (IEI) and Unexplained Neurological Manifestations
Jesmeen Maimaris, Julia L. Payne, Adriel Roa-Bautista, et al.
Journal of Clinical Immunology (2025) Vol. 45, Iss. 1
Open Access | Times Cited: 1
Enhanced Viral Metagenomics with Lazypipe 2
Ilya Plyusnin, Olli Vapalahti, Tarja Sironen, et al.
Viruses (2023) Vol. 15, Iss. 2, pp. 431-431
Open Access | Times Cited: 18
“Smart markets”: harnessing the potential of new technologies for endemic and emerging infectious disease surveillance in traditional food markets
Benjamín L. Sievers, Jurre Y. Siegers, Jimmy M. Cadènes, et al.
Journal of Virology (2024) Vol. 98, Iss. 2
Open Access | Times Cited: 7
Comparison of the performance of two targeted metagenomic virus capture probe-based methods using reference control materials and clinical samples
Kees Mourik, Igor A. Sidorov, Ellen C. Carbo, et al.
Journal of Clinical Microbiology (2024) Vol. 62, Iss. 6
Closed Access | Times Cited: 6
Multicenter benchmarking of short and long read wet lab protocols for clinical viral metagenomics
F. Xavier López‐Labrador, Michael Huber, Igor A. Sidorov, et al.
Journal of Clinical Virology (2024) Vol. 173, pp. 105695-105695
Open Access | Times Cited: 6
Multicenter assessment of shotgun metagenomics for pathogen detection
Donglai Liu, Haiwei Zhou, Teng Xu, et al.
EBioMedicine (2021) Vol. 74, pp. 103649-103649
Open Access | Times Cited: 30
INSaFLU-TELEVIR: an open web-based bioinformatics suite for viral metagenomic detection and routine genomic surveillance
João Dourado Santos, Daniel Sobral, Miguel Pinheiro, et al.
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 4
Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses
Sarah Buddle, Leysa Forrest, Naomi Akinsuyi, et al.
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 4
VirHunter: A Deep Learning-Based Method for Detection of Novel RNA Viruses in Plant Sequencing Data
Grigorii Sukhorukov, Maryam Khalili, Olivier Gascuel, et al.
Frontiers in Bioinformatics (2022) Vol. 2
Open Access | Times Cited: 19
Assessing the Quality of Metagenomic Next-Generation Sequencing for Pathogen Detection in Lower Respiratory Infections
Zhenli Diao, Yuanfeng Zhang, Yuqing Chen, et al.
Clinical Chemistry (2023) Vol. 69, Iss. 9, pp. 1038-1049
Closed Access | Times Cited: 10
Untargeted metagenomics protocol for the diagnosis of infection from CSF and tissue from sterile sites
Laura Atkinson, Jack C. D. Lee, Alexander Lennon, et al.
Heliyon (2023) Vol. 9, Iss. 9, pp. e19854-e19854
Open Access | Times Cited: 10
Metagenomic and transcriptomic investigation of pediatric acute liver failure cases reveals a common pathway predominated by monocytes
Ruben H. de Kleine, Ellen C. Carbo, Willem S. Lexmond, et al.
mBio (2025)
Open Access
Leveraging innovative diagnostics as a tool to contain superbugs
Ngozi Joannes Anyaegbunam, Kenneth Emenike Okpe, Aisha Bisola Bello, et al.
Antonie van Leeuwenhoek (2025) Vol. 118, Iss. 4
Closed Access
A Comprehensive Assessment of Metagenomic cfDNA Sequencing for Microbe Detection
Zhenli Diao, Zihong Zhao, Yanxi Han, et al.
Clinical Chemistry (2025)
Closed Access
Lazypipe3: Customizable Virome Analysis Pipeline Enabling Fast and Sensitive Virus Discovery from NGS data
I. Bernard Weinstein, Olli Vapalahti, Ravi Kant, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
The use of metagenomics to enhance diagnosis of Encephalitis
Sarah Buddle, Oscar Walter Torres, Sofia Morfopoulou, et al.
Expert Review of Molecular Diagnostics (2025)
Closed Access
Metagenomics characterization of respiratory viral RNA pathogens in children under five years with severe acute respiratory infection in the Free State, South Africa
Ayodeji Ogunbayo, Milton T. Mogotsi, Hlengiwe Sondlane, et al.
Journal of Medical Virology (2023) Vol. 95, Iss. 5
Open Access | Times Cited: 9
Viral metagenomic sequencing in the diagnosis of meningoencephalitis: a review of technical advances and diagnostic yield
Ellen C. Carbo, Ivar Blankenspoor, Jelle J. Goeman, et al.
Expert Review of Molecular Diagnostics (2021) Vol. 21, Iss. 11, pp. 1139-1146
Open Access | Times Cited: 19
Optimization of cerebrospinal fluid microbial DNA metagenomic sequencing diagnostics
Josefin Olausson, Sofia Brunet, Diana Vracar, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 14
Benchmarking Bioinformatic Virus Identification Tools Using Real-World Metagenomic Data across Biomes
Ling-Yi Wu, Nikolaos Pappas, Yasas Wijesekara, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 7
Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses
Sarah Buddle, Leysa Forrest, Naomi Akinsuyi, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Page 1 - Next Page

Scroll to top