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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Enhancer Logic and Mechanics in Development and Disease
Ryan Rickels, Ali Shilatifard
Trends in Cell Biology (2018) Vol. 28, Iss. 8, pp. 608-630
Closed Access | Times Cited: 167

Showing 1-25 of 167 citing articles:

Epigenetic modifications of histones in cancer
Zibo Zhao, Ali Shilatifard
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 454
SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks
Carmen Bravo González‐Blas, Seppe De Winter, Gert Hulselmans, et al.
Nature Methods (2023) Vol. 20, Iss. 9, pp. 1355-1367
Open Access | Times Cited: 296
Reevaluating the roles of histone-modifying enzymes and their associated chromatin modifications in transcriptional regulation
Marc A. Morgan, Ali Shilatifard
Nature Genetics (2020) Vol. 52, Iss. 12, pp. 1271-1281
Closed Access | Times Cited: 293
Mechanisms of enhancer action: the known and the unknown
Anil K. Panigrahi, Bert W. O’Malley
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 267
DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers
Bernardo P. de Almeida, Franziska Reiter, Michaela Pagani, et al.
Nature Genetics (2022) Vol. 54, Iss. 5, pp. 613-624
Open Access | Times Cited: 189
A transformer architecture based on BERT and 2D convolutional neural network to identify DNA enhancers from sequence information
Nguyen Quoc Khanh Le, Quang‐Thai Ho, Trinh‐Trung‐Duong Nguyen, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Closed Access | Times Cited: 148
Enhancers in disease: molecular basis and emerging treatment strategies
Annique Claringbould, Judith B. Zaugg
Trends in Molecular Medicine (2021) Vol. 27, Iss. 11, pp. 1060-1073
Open Access | Times Cited: 147
Enhancer grammar in development, evolution, and disease: dependencies and interplay
Granton A. Jindal, Emma K. Farley
Developmental Cell (2021) Vol. 56, Iss. 5, pp. 575-587
Open Access | Times Cited: 120
Massively parallel characterization of transcriptional regulatory elements in three diverse human cell types
Vikram Agarwal, Fumitaka Inoue, Max Schubach, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 46
DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation
Laura Godfrey, Nicholas T. Crump, Ross Thorne, et al.
Nature Communications (2019) Vol. 10, Iss. 1
Open Access | Times Cited: 136
UTX Mutations in Human Cancer
Lu Wang, Ali Shilatifard
Cancer Cell (2019) Vol. 35, Iss. 2, pp. 168-176
Open Access | Times Cited: 132
Exploring the genetic basis of human population differences in DNA methylation and their causal impact on immune gene regulation
Lucas Husquin, Maxime Rotival, Maud Fagny, et al.
Genome biology (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 116
HDAC7 regulates histone 3 lysine 27 acetylation and transcriptional activity at super-enhancer-associated genes in breast cancer stem cells
Corrado Caslini, Sunhwa Hong, Yuguang Ban, et al.
Oncogene (2019) Vol. 38, Iss. 39, pp. 6599-6614
Open Access | Times Cited: 102
A validated single-cell-based strategy to identify diagnostic and therapeutic targets in complex diseases
Danuta R. Gawel, Jordi Serra-Musach, Sandra Lilja, et al.
Genome Medicine (2019) Vol. 11, Iss. 1
Open Access | Times Cited: 92
Genome-wide profiling in colorectal cancer identifies PHF19 and TBC1D16 as oncogenic super enhancers
Qinglan Li, Xiang Lin, Yali Yu, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 78
DNA methylation mediates development of HbA1c-associated complications in type 1 diabetes
Zhuo Chen, Miao Feng, Barbara H. Braffett, et al.
Nature Metabolism (2020) Vol. 2, Iss. 8, pp. 744-762
Open Access | Times Cited: 74
SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks
Carmen Bravo González‐Blas, Seppe De Winter, Gert Hulselmans, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 61
“Stripe” transcription factors provide accessibility to co-binding partners in mammalian genomes
Yongbing Zhao, Supriya V. Vartak, A. Conte, et al.
Molecular Cell (2022) Vol. 82, Iss. 18, pp. 3398-3411.e11
Open Access | Times Cited: 52
Current challenges in understanding the role of enhancers in disease
Judith B. Zaugg, Pelin Sahlén, Robin Andersson, et al.
Nature Structural & Molecular Biology (2022) Vol. 29, Iss. 12, pp. 1148-1158
Open Access | Times Cited: 48
Enhancer-gene specificity in development and disease
Tomás Pachano, Endika Haro, Álvaro Rada-Iglesias
Development (2022) Vol. 149, Iss. 11
Open Access | Times Cited: 43
Runx2 regulates chromatin accessibility to direct the osteoblast program at neonatal stages
Hironori Hojo, Taku Saito, Xinjun He, et al.
Cell Reports (2022) Vol. 40, Iss. 10, pp. 111315-111315
Open Access | Times Cited: 40
A Prox1 enhancer represses haematopoiesis in the lymphatic vasculature
Jan Kazenwadel, Parvathy Venugopal, Anna Oszmiana, et al.
Nature (2023) Vol. 614, Iss. 7947, pp. 343-348
Closed Access | Times Cited: 27
Transcriptional reprogramming at the intersection of the heat shock response and proteostasis
Jenny C. Pessa, Jenny Joutsen, Lea Sistonen
Molecular Cell (2023) Vol. 84, Iss. 1, pp. 80-93
Open Access | Times Cited: 24
Dual-role transcription factors stabilize intermediate expression levels
Jinnan He, Xiangru Huo, Gaofeng Pei, et al.
Cell (2024) Vol. 187, Iss. 11, pp. 2746-2766.e25
Closed Access | Times Cited: 14
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types
Yoav Ben‐Simon, Marcus Hooper, Sujatha Narayan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 11
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