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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Interpreting omics data with pathway enrichment analysis
Kangmei Zhao, Seung Y. Rhee
Trends in Genetics (2023) Vol. 39, Iss. 4, pp. 308-319
Open Access | Times Cited: 38

Showing 1-25 of 38 citing articles:

Using clusterProfiler to characterize multiomics data
Shuangbin Xu, Erqiang Hu, Yantong Cai, et al.
Nature Protocols (2024) Vol. 19, Iss. 11, pp. 3292-3320
Closed Access | Times Cited: 136
Generalized reporter score-based enrichment analysis for omics data
Peng Chen, Qiong Chen, Shangjin Tan, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 3
Open Access | Times Cited: 15
Properties of “Stable” Mosquito Cytochrome P450 Enzymes
George T. Tzotzos
Insects (2025) Vol. 16, Iss. 2, pp. 184-184
Open Access
Ultrasound-assisted metabolite detection in different extraction processes of Bletilla striata and bitter metabolite detection
Juan Zhou, Yu‐Qi Feng, Wenhao Zhou, et al.
Ultrasonics Sonochemistry (2025) Vol. 114, pp. 107266-107266
Open Access
Transcriptomic profiling of murine GnRH neurons reveals developmental trajectories linked to human reproduction and infertility
Yassine Zouaghi, Daniel Alpern, Vincent Gardeux, et al.
Theranostics (2025) Vol. 15, Iss. 8, pp. 3673-3692
Open Access
Will AI Replace Physicians? A Review of Artificial Intelligence Applications in Kidney Transplantation
Weijie Lai, Min Jeong, Linjie Peng
Organ medicine. (2025)
Open Access
Conjunctival MicroRNA Expression Signature in Primary Sjögren's Syndrome Dry Eye: A NanoString-Based Bioinformatic Analysis
Francesca Giovannetti, Paola Pontecorvi, Francesca Megiorni, et al.
Investigative Ophthalmology & Visual Science (2025) Vol. 66, Iss. 4, pp. 80-80
Open Access
Plasma proteins and coronary atherosclerosis: A Mendelian randomization study
Henan Pan, Zongkai Wu, Yaran Gao, et al.
Medicine (2025) Vol. 104, Iss. 8, pp. e41549-e41549
Open Access
hTERT and SV40LgT Renal Cell Lines Adjust Their Transcriptional Responses After Copy Number Changes from the Parent Proximal Tubule Cells
B. Alex Merrick, Ashley M. Brooks, Julie F. Foley, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 8, pp. 3607-3607
Open Access
SIMPEL: using stable isotopes to elucidate dynamics of context specific metabolism
Shrikaar Kambhampati, Allen Hubbard, Somnath Koley, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 2
Comparative analysis of single-cell pathway scoring methods and a novel approach
Ruoqiao Huiyi Wang, Juilee Thakar
NAR Genomics and Bioinformatics (2024) Vol. 6, Iss. 3
Open Access | Times Cited: 2
Innovative omics strategies in fermented fruits and vegetables: Unveiling nutritional profiles, microbial diversity, and future prospects
Yuhao Li, Weiwei He, Shuai Liu, et al.
Comprehensive Reviews in Food Science and Food Safety (2024) Vol. 23, Iss. 6
Closed Access | Times Cited: 2
Metabolomic insights into the multiple stress responses of metabolites in major oilseed crops
Habtamu Kefale, Jun You, Yanxin Zhang, et al.
Physiologia Plantarum (2024) Vol. 176, Iss. 6
Closed Access | Times Cited: 2
Unlocking biological insights from differentially expressed Genes: Concepts, methods, and future perspectives
Huachun Yin, Hongrui Duo, Li Song, et al.
Journal of Advanced Research (2024)
Open Access | Times Cited: 2
Engineering Genomic Landscapes: Synthetic Biology Approaches in Genomic Rearrangement
Gholamreza Abdi, Nil Patil, Reshma Tendulkar, et al.
(2024), pp. 227-264
Closed Access | Times Cited: 1
Enrichment analysis for spatial and single-cell metabolomics accounting for molecular ambiguity
Bishoy Wadie, Martijn R. Molenaar, Lucas Vieira, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Facilitating pathway and network based analysis of RNA-Seq data with pathlinkR
Travis M. Blimkie, Yi Andy An, Robert E. W. Hancock
PLoS Computational Biology (2024) Vol. 20, Iss. 9, pp. e1012422-e1012422
Open Access | Times Cited: 1
Two subtle problems with over-representation analysis
Mark Ziemann, Barry Schroeter, Anusuiya Bora
Bioinformatics Advances (2024) Vol. 4, Iss. 1
Open Access | Times Cited: 1
Broad repression of DNA repair genes in senescent cells identified by integration of transcriptomic data
Yann Frey, Majd Haj, Yael Ziv, et al.
Nucleic Acids Research (2024)
Open Access | Times Cited: 1
Deciphering molecular basis of pesticide-induced recurrent pregnancy loss: insights from transcriptomics analysis
Muhammad Luthfi, R. B. Pandey, Yong‐Chao Su, et al.
Toxicology Mechanisms and Methods (2024) Vol. 34, Iss. 5, pp. 527-544
Closed Access | Times Cited: 1
Combined bulk RNA and single-cell RNA analyses reveal TXNL4A as a new biomarker for hepatocellular carcinoma
Yifan Li, Qiaozhen Zhu, Shuchang Zhou, et al.
Frontiers in Oncology (2023) Vol. 13
Open Access | Times Cited: 3
Lineage Plasticity and Stemness Phenotypes in Prostate Cancer: Harnessing the Power of Integrated “Omics” Approaches to Explore Measurable Metrics
Souzana Logotheti, Eugenia Papadaki, Vasiliki Zolota, et al.
Cancers (2023) Vol. 15, Iss. 17, pp. 4357-4357
Open Access | Times Cited: 3
An R package for Survival-based Gene Set Enrichment Analysis
Xiaoxu Deng, Jeffrey Thompson
Research Square (Research Square) (2023)
Open Access | Times Cited: 3
Generalized Reporter Score-based Enrichment Analysis for Omics Data
Peng Chen, Qiong Chen, Shangjin Tan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
Lipid emulsion structure, digestion behavior, physiology, and health: a scoping review and future directions
Erik S. Dassoff, Arshia Shireen, Amanda J. Wright
Critical Reviews in Food Science and Nutrition (2023), pp. 1-33
Open Access | Times Cited: 3
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