Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Development of Phylodynamic Methods for Bacterial Pathogens
Danielle J. Ingle, Benjamin P. Howden, Sebastián Duchêne
Trends in Microbiology (2021) Vol. 29, Iss. 9, pp. 788-797
Closed Access | Times Cited: 32

Showing 1-25 of 32 citing articles:

Phylogenetic and phylodynamic approaches to understanding and combating the early SARS-CoV-2 pandemic
Stephen W. Attwood, Sarah C. Hill, David M. Aanensen, et al.
Nature Reviews Genetics (2022) Vol. 23, Iss. 9, pp. 547-562
Open Access | Times Cited: 120
Genomic surveillance for antimicrobial resistance — a One Health perspective
Steven P. Djordjevic, Veronica M. Jarocki, Torsten Seemann, et al.
Nature Reviews Genetics (2023) Vol. 25, Iss. 2, pp. 142-157
Closed Access | Times Cited: 105
Progress and challenges in virus genomic epidemiology
Verity Hill, Christopher Ruis, Sumali Bajaj, et al.
Trends in Parasitology (2021) Vol. 37, Iss. 12, pp. 1038-1049
Open Access | Times Cited: 73
Genomic comparisons of Escherichia coli ST131 from Australia
Dmitriy Li, Ethan R. Wyrsch, Paarthiphan Elankumaran, et al.
Microbial Genomics (2021) Vol. 7, Iss. 12
Open Access | Times Cited: 37
Research Progress and Future Trends of Microfluidic Paper-Based Analytical Devices in In-Vitro Diagnosis
Taiyi Zhang, Feng Ding, Yujing Yang, et al.
Biosensors (2022) Vol. 12, Iss. 7, pp. 485-485
Open Access | Times Cited: 27
Epidemiological inference from pathogen genomes: A review of phylodynamic models and applications
Leo Featherstone, Joshua M Zhang, Timothy G. Vaughan, et al.
Virus Evolution (2022) Vol. 8, Iss. 1
Open Access | Times Cited: 26
A scalable analytical approach from bacterial genomes to epidemiology
Xavier Didelot, Julian Parkhill
Philosophical Transactions of the Royal Society B Biological Sciences (2022) Vol. 377, Iss. 1861
Open Access | Times Cited: 23
Emerging applications of artificial intelligence in pathogen genomics
C. J. E. Suster, David Pham, Jen Kok, et al.
Frontiers in Bacteriology (2024) Vol. 3
Open Access | Times Cited: 3
Integrative genomics would strengthen AMR understanding through ONE health approach
Chinky Shiu Chen Liu, Rajesh Pandey
Heliyon (2024) Vol. 10, Iss. 14, pp. e34719-e34719
Open Access | Times Cited: 3
Phylodynamic signatures in the emergence of community-associated MRSA
Eike Steinig, Izzard Aglua, Sebastián Duchêne, et al.
Proceedings of the National Academy of Sciences (2022) Vol. 119, Iss. 45
Open Access | Times Cited: 15
Leveraging insect-specific viruses to elucidate mosquito population structure and dynamics
Brandon Hollingsworth, Nathan D. Grubaugh, Brian P. Lazzaro, et al.
PLoS Pathogens (2023) Vol. 19, Iss. 8, pp. e1011588-e1011588
Open Access | Times Cited: 7
Impacts of coprophagic foraging behaviour on the avian gut microbiome
Alice Dunbar, Barbara Drigo, Steven P. Djordjevic, et al.
Biological reviews/Biological reviews of the Cambridge Philosophical Society (2023) Vol. 99, Iss. 2, pp. 582-597
Open Access | Times Cited: 7
Application of phylodynamics to identify spread of antimicrobial-resistant Escherichia coli between humans and canines in an urban environment
Nikolina Walas, Nicola F. Müller, Emily Parker, et al.
The Science of The Total Environment (2024) Vol. 916, pp. 170139-170139
Open Access | Times Cited: 2
e3SIM: epidemiological-ecological-evolutionary simulation framework for genomic epidemiology
Peiyu Xu, Shenni Liang, Andrew W. Hahn, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Phylodynamic Inference of Bacterial Outbreak Parameters Using Nanopore Sequencing
Eike Steinig, Sebastián Duchêne, Izzard Aglua, et al.
Molecular Biology and Evolution (2022) Vol. 39, Iss. 3
Open Access | Times Cited: 10
High performance Legionella pneumophila source attribution using genomics-based machine learning classification
Andrew H. Buultjens, Koen Vandelannoote, Karolina Mercoulia, et al.
Applied and Environmental Microbiology (2024)
Open Access | Times Cited: 1
Quantifying the genomic determinants of fitness inE. coliST131 using phylodynamics
Lenora Kepler, Manuel López Jara, Bejan Mahmud, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Pathogen genomics and One Health: A scoping review of current practices in zoonotic disease research
Stefano Catalano, Francesca Battelli, Zoumana Traoré, et al.
IJID One Health (2024) Vol. 4, pp. 100031-100031
Open Access | Times Cited: 1
Harnessing genomic technologies for one health solutions in the tropics
Andrew D. Calcino, Ira Cooke, Pete Cowman, et al.
Globalization and Health (2024) Vol. 20, Iss. 1
Open Access | Times Cited: 1
Population genomics of diarrheagenic Escherichia coli uncovers high connectivity between urban and rural communities in Ecuador
Andrew P. Rothstein, Kelsey J. Jesser, Dorian J. Feistel, et al.
Infection Genetics and Evolution (2023) Vol. 113, pp. 105476-105476
Open Access | Times Cited: 3
Genome-wide phylodynamic approach reveals the epidemic dynamics of the main Mycoplasma bovis subtype circulating in France
Julien Thézé, Chloé Ambroset, Séverine Barry, et al.
Microbial Genomics (2023) Vol. 9, Iss. 7
Open Access | Times Cited: 3
Evaluation of recombination detection methods for viral sequencing
Frederick R. Jaya, Bárbara Brito, Aaron E. Darling
Virus Evolution (2023) Vol. 9, Iss. 2
Open Access | Times Cited: 2
Transmission dynamics of an antimicrobial resistant Campylobacter jejuni lineage in New Zealand’s commercial poultry network
Sabrina S. Greening, Ji Zhang, Anne C. Midwinter, et al.
Epidemics (2021) Vol. 37, pp. 100521-100521
Open Access | Times Cited: 5
Phylogenetic Analysis Detected Newly Identified Phylogroups in Uropathogenic Escherichia coli Isolates in Iraq
Nima Yakhchalian, Hiba Jasim Hamza, Huda H. Al-Hasnawy, et al.
Authorea (Authorea) (2024)
Open Access
Pathogen genomics and One Health: a scoping review of current practices in zoonotic disease research
Stefano Catalano, Francesca Battelli, Zoumana Traoré, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Page 1 - Next Page

Scroll to top