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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Development of a virus detection and discovery pipeline using next generation sequencing
Thiện Hồ, Ioannis E. Tzanetakis
Virology (2014) Vol. 471-473, pp. 54-60
Open Access | Times Cited: 183

Showing 1-25 of 183 citing articles:

mNGS in clinical microbiology laboratories: on the road to maturity
Dongsheng Han, Ziyang Li, Rui Li, et al.
Critical Reviews in Microbiology (2019) Vol. 45, Iss. 5-6, pp. 668-685
Closed Access | Times Cited: 268
High Throughput Sequencing For Plant Virus Detection and Discovery
D. E. V. Villamor, Thiện Hồ, Maher Al Rwahnih, et al.
Phytopathology (2019) Vol. 109, Iss. 5, pp. 716-725
Open Access | Times Cited: 263
VirusDetect: An automated pipeline for efficient virus discovery using deep sequencing of small RNAs
Yi Zheng, Shan Gao, Chellappan Padmanabhan, et al.
Virology (2016) Vol. 500, pp. 130-138
Open Access | Times Cited: 213
Virological and Immunological Outcomes of Coinfections
Naveen Kumar, Shalini Sharma, Sanjay Barua, et al.
Clinical Microbiology Reviews (2018) Vol. 31, Iss. 4
Open Access | Times Cited: 210
Viral communities of the human gut: metagenomic analysis of composition and dynamics
Varun Aggarwala, Guanxiang Liang, Frederic D. Bushman
Mobile DNA (2017) Vol. 8, Iss. 1
Open Access | Times Cited: 135
Human Virome and Disease: High-Throughput Sequencing for Virus Discovery, Identification of Phage-Bacteria Dysbiosis and Development of Therapeutic Approaches with Emphasis on the Human Gut
Tasha M. Santiago-Rodríguez, Emily B. Hollister
Viruses (2019) Vol. 11, Iss. 7, pp. 656-656
Open Access | Times Cited: 134
Next-Generation Sequencing and Genome Editing in Plant Virology
A. Hadidi, Ricardo Flores, Thierry Candresse, et al.
Frontiers in Microbiology (2016) Vol. 7
Open Access | Times Cited: 133
VirusSeeker, a computational pipeline for virus discovery and virome composition analysis
Guoyan Zhao, Guang Wu, Efrem S. Lim, et al.
Virology (2017) Vol. 503, pp. 21-30
Open Access | Times Cited: 128
Diagnosis of plant diseases using the Nanopore sequencing platform
Laura Chalupowicz, Aviv Dombrovsky, Victor Gaba, et al.
Plant Pathology (2018) Vol. 68, Iss. 2, pp. 229-238
Open Access | Times Cited: 126
Overview of Virus Metagenomic Classification Methods and Their Biological Applications
Sam Nooij, Dennis Schmitz, Harry Vennema, et al.
Frontiers in Microbiology (2018) Vol. 9
Open Access | Times Cited: 118
High‐throughput identification and diagnostics of pathogens and pests: Overview and practical recommendations
Leho Tedersoo, Rein Drenkhan, Sten Anslan, et al.
Molecular Ecology Resources (2018) Vol. 19, Iss. 1, pp. 47-76
Open Access | Times Cited: 115
Application of Next Generation Sequencing for Diagnostic Testing of Tree Fruit Viruses and Viroids
M. Rott, Yan Xiang, Ian Boyes, et al.
Plant Disease (2017) Vol. 101, Iss. 8, pp. 1489-1499
Open Access | Times Cited: 109
VIP: an integrated pipeline for metagenomics of virus identification and discovery
Li Yang, Hao Wang, Kai Nie, et al.
Scientific Reports (2016) Vol. 6, Iss. 1
Open Access | Times Cited: 108
V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data
Susana Posada-Céspedes, David Seifert, Ivan Topolsky, et al.
Bioinformatics (2021) Vol. 37, Iss. 12, pp. 1673-1680
Open Access | Times Cited: 98
Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice
Susan R. Jones, Amanda Baizan-Edge, Stuart A. MacFarlane, et al.
Frontiers in Plant Science (2017) Vol. 8
Open Access | Times Cited: 97
Safeguarding Fruit Crops in the Age of Agricultural Globalization
Rose C. Gergerich, R. Welliver, Nancy Osterbauer, et al.
Plant Disease (2015) Vol. 99, Iss. 2, pp. 176-187
Open Access | Times Cited: 91
Quarantine Regulations and the Impact of Modern Detection Methods
Robert R. Martín, Fiona Constable, Ioannis E. Tzanetakis
Annual Review of Phytopathology (2016) Vol. 54, Iss. 1, pp. 189-205
Closed Access | Times Cited: 77
The evolution of emaraviruses is becoming more complex: seven segments identified in the causal agent of Rose rosette disease
Patrick L. Di Bello, Thiện Hồ, Ioannis E. Tzanetakis
Virus Research (2015) Vol. 210, pp. 241-244
Closed Access | Times Cited: 73
Discovering and sequencing new plant viral genomes by next‐generation sequencing: description of a practical pipeline
Rosana Blawid, João Marcos Fagundes Silva, Tatsuya Nagata
Annals of Applied Biology (2017) Vol. 170, Iss. 3, pp. 301-314
Closed Access | Times Cited: 65
A Primer on the Analysis of High-Throughput Sequencing Data for Detection of Plant Viruses
Denis Kutnjak, Lucie Tamisier, Ian P. Adams, et al.
Microorganisms (2021) Vol. 9, Iss. 4, pp. 841-841
Open Access | Times Cited: 55
Towards the validation of high-throughput sequencing (HTS) for routine plant virus diagnostics: measurement of variation linked to HTS detection of citrus viruses and viroids
Rachelle Bester, Glynnis Cook, Johannes H. J. Breytenbach, et al.
Virology Journal (2021) Vol. 18, Iss. 1
Open Access | Times Cited: 48
An internet-based bioinformatics toolkit for plant biosecurity diagnosis and surveillance of viruses and viroids
Roberto A. Barrero, Kathryn Napier, J. H. Cunnington, et al.
BMC Bioinformatics (2017) Vol. 18, Iss. 1
Open Access | Times Cited: 53
Screening for plant viruses by next generation sequencing using a modified double strand RNA extraction protocol with an internal amplification control
Prasad Kesanakurti, Mark Belton, Hanaa Saeed, et al.
Journal of Virological Methods (2016) Vol. 236, pp. 35-40
Closed Access | Times Cited: 49
A new, widespread emaravirus discovered in blackberry
M. Hassan, Patrick L. Di Bello, Karen E. Keller, et al.
Virus Research (2017) Vol. 235, pp. 1-5
Open Access | Times Cited: 49
virMine: automated detection of viral sequences from complex metagenomic samples
Andrea Garretto, Thomas Hatzopoulos, Catherine Putonti
PeerJ (2019) Vol. 7, pp. e6695-e6695
Open Access | Times Cited: 46
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