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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

VirusSeeker, a computational pipeline for virus discovery and virome composition analysis
Guoyan Zhao, Guang Wu, Efrem S. Lim, et al.
Virology (2017) Vol. 503, pp. 21-30
Open Access | Times Cited: 128

Showing 1-25 of 128 citing articles:

Minimum Information about an Uncultivated Virus Genome (MIUViG)
Simon Roux, Evelien M. Adriaenssens, Bas E. Dutilh, et al.
Nature Biotechnology (2018) Vol. 37, Iss. 1, pp. 29-37
Open Access | Times Cited: 572
Laboratory mice born to wild mice have natural microbiota and model human immune responses
Stephan P. Rosshart, Jasmin Herz, Brian G. Vassallo, et al.
Science (2019) Vol. 365, Iss. 6452
Open Access | Times Cited: 469
The human virome: assembly, composition and host interactions
Guanxiang Liang, Frederic D. Bushman
Nature Reviews Microbiology (2021) Vol. 19, Iss. 8, pp. 514-527
Open Access | Times Cited: 435
Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children
Guoyan Zhao, Tommi Vatanen, Lindsay Droit, et al.
Proceedings of the National Academy of Sciences (2017) Vol. 114, Iss. 30
Open Access | Times Cited: 273
High Throughput Sequencing For Plant Virus Detection and Discovery
D. E. V. Villamor, Thiện Hồ, Maher Al Rwahnih, et al.
Phytopathology (2019) Vol. 109, Iss. 5, pp. 716-725
Open Access | Times Cited: 263
Review article: the human intestinal virome in health and disease
Simon R. Carding, Nicole M. Davis, Lesley Hoyles
Alimentary Pharmacology & Therapeutics (2017) Vol. 46, Iss. 9, pp. 800-815
Open Access | Times Cited: 221
Amniotic fluid from healthy term pregnancies does not harbor a detectable microbial community
Efrem S. Lim, Cynthia Rodríguez, Lori R. Holtz
Microbiome (2018) Vol. 6, Iss. 1
Open Access | Times Cited: 147
Viral communities of the human gut: metagenomic analysis of composition and dynamics
Varun Aggarwala, Guanxiang Liang, Frederic D. Bushman
Mobile DNA (2017) Vol. 8, Iss. 1
Open Access | Times Cited: 135
Human Virome and Disease: High-Throughput Sequencing for Virus Discovery, Identification of Phage-Bacteria Dysbiosis and Development of Therapeutic Approaches with Emphasis on the Human Gut
Tasha M. Santiago-Rodríguez, Emily B. Hollister
Viruses (2019) Vol. 11, Iss. 7, pp. 656-656
Open Access | Times Cited: 134
Beyond Just Bacteria: Functional Biomes in the Gut Ecosystem Including Virome, Mycobiome, Archaeome and Helminths
Ravichandra Vemuri, Esaki M. Shankar, Marcello Chieppa, et al.
Microorganisms (2020) Vol. 8, Iss. 4, pp. 483-483
Open Access | Times Cited: 128
Overview of Virus Metagenomic Classification Methods and Their Biological Applications
Sam Nooij, Dennis Schmitz, Harry Vennema, et al.
Frontiers in Microbiology (2018) Vol. 9
Open Access | Times Cited: 118
Metagenomic Approaches to Assess Bacteriophages in Various Environmental Niches
Stephen J. Hayes, Jennifer Mahony, Arjen Nauta, et al.
Viruses (2017) Vol. 9, Iss. 6, pp. 127-127
Open Access | Times Cited: 106
Discordant transmission of bacteria and viruses from mothers to babies at birth
Rabia Maqsood, Rachel Rodgers, Cynthia Rodríguez, et al.
Microbiome (2019) Vol. 7, Iss. 1
Open Access | Times Cited: 101
V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data
Susana Posada-Céspedes, David Seifert, Ivan Topolsky, et al.
Bioinformatics (2021) Vol. 37, Iss. 12, pp. 1673-1680
Open Access | Times Cited: 98
A metagenomic viral discovery approach identifies potential zoonotic and novel mammalian viruses in Neoromicia bats within South Africa
Marike Geldenhuys, Marinda Mortlock, Jacqueline Weyer, et al.
PLoS ONE (2018) Vol. 13, Iss. 3, pp. e0194527-e0194527
Open Access | Times Cited: 94
Viral complementation of immunodeficiency confers protection against enteric pathogens via interferon-λ
Harshad Ingle, Sanghyun Lee, Teresa L. Ai, et al.
Nature Microbiology (2019) Vol. 4, Iss. 7, pp. 1120-1128
Open Access | Times Cited: 90
Relatives of rubella virus in diverse mammals
Andrew J. Bennett, Adrian C. Paskey, Arnt Ebinger, et al.
Nature (2020) Vol. 586, Iss. 7829, pp. 424-428
Open Access | Times Cited: 89
Current challenges to virus discovery by meta-transcriptomics
Joanna C. A. Cobbin, Justine Charon, Erin Harvey, et al.
Current Opinion in Virology (2021) Vol. 51, pp. 48-55
Open Access | Times Cited: 83
Gauge your phage: benchmarking of bacteriophage identification tools in metagenomic sequencing data
Siu Fung Stanley Ho, Nicole E. Wheeler, Andrew Millard, et al.
Microbiome (2023) Vol. 11, Iss. 1
Open Access | Times Cited: 33
Correlation between the gut microbiome and neurodegenerative diseases: a review of metagenomics evidence
Xiaoyan Liu, Yi Liu, Junlin Liu, et al.
Neural Regeneration Research (2023) Vol. 19, Iss. 4, pp. 833-845
Open Access | Times Cited: 31
Detecting viral sequences in NGS data
Paul G. Cantalupo, James M. Pipas
Current Opinion in Virology (2019) Vol. 39, pp. 41-48
Closed Access | Times Cited: 62
High-throughput sequencing (HTS) for the analysis of viral populations
Marcos Pérez‐Losada, Miguel Arenas, Juan Carlos Galán, et al.
Infection Genetics and Evolution (2020) Vol. 80, pp. 104208-104208
Closed Access | Times Cited: 56
Towards the validation of high-throughput sequencing (HTS) for routine plant virus diagnostics: measurement of variation linked to HTS detection of citrus viruses and viroids
Rachelle Bester, Glynnis Cook, Johannes H. J. Breytenbach, et al.
Virology Journal (2021) Vol. 18, Iss. 1
Open Access | Times Cited: 48
Contamination Issue in Viral Metagenomics: Problems, Solutions, and Clinical Perspectives
Henryk Jurasz, Tomasz Pawłowski, Karol Perlejewski
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 46
Evaluation of computational phage detection tools for metagenomic datasets
Kenneth Schackart, Jessica B. Graham, Alise J. Ponsero, et al.
Frontiers in Microbiology (2023) Vol. 14
Open Access | Times Cited: 20
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