
OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Vina-GPU 2.0: Further Accelerating AutoDock Vina and Its Derivatives with Graphics Processing Units
Ji Ding, Shidi Tang, Zheming Mei, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 7, pp. 1982-1998
Closed Access | Times Cited: 62
Ji Ding, Shidi Tang, Zheming Mei, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 7, pp. 1982-1998
Closed Access | Times Cited: 62
Showing 1-25 of 62 citing articles:
Advancements and novel approaches in modified AutoDock Vina algorithms for enhanced molecular docking
Arkadeep Sarkar, Simona Concilio, Lucia Sessa, et al.
Results in Chemistry (2024) Vol. 7, pp. 101319-101319
Open Access | Times Cited: 21
Arkadeep Sarkar, Simona Concilio, Lucia Sessa, et al.
Results in Chemistry (2024) Vol. 7, pp. 101319-101319
Open Access | Times Cited: 21
An accurate and universal protein-small molecule batch docking solution using Autodock Vina
Xinhao Che, Qilei Liu, Lei Zhang
Results in Engineering (2023) Vol. 19, pp. 101335-101335
Open Access | Times Cited: 28
Xinhao Che, Qilei Liu, Lei Zhang
Results in Engineering (2023) Vol. 19, pp. 101335-101335
Open Access | Times Cited: 28
Network pharmacology, molecular docking, and molecular dynamics simulation to elucidate the mechanism of anti-aging action of Tinospora cordifolia
Amisha Bisht, Disha Tewari, Sanjay Kumar, et al.
Molecular Diversity (2023) Vol. 28, Iss. 3, pp. 1743-1763
Closed Access | Times Cited: 27
Amisha Bisht, Disha Tewari, Sanjay Kumar, et al.
Molecular Diversity (2023) Vol. 28, Iss. 3, pp. 1743-1763
Closed Access | Times Cited: 27
DrugFlow: An AI-Driven One-Stop Platform for Innovative Drug Discovery
Chao Shen, Jianfei Song, Chang‐Yu Hsieh, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 14, pp. 5381-5391
Closed Access | Times Cited: 10
Chao Shen, Jianfei Song, Chang‐Yu Hsieh, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 14, pp. 5381-5391
Closed Access | Times Cited: 10
From GPUs to AI and quantum: three waves of acceleration in bioinformatics
Bertil Schmidt, Andreas Hildebrandt
Drug Discovery Today (2024) Vol. 29, Iss. 6, pp. 103990-103990
Open Access | Times Cited: 7
Bertil Schmidt, Andreas Hildebrandt
Drug Discovery Today (2024) Vol. 29, Iss. 6, pp. 103990-103990
Open Access | Times Cited: 7
CarsiDock: a deep learning paradigm for accurate protein–ligand docking and screening based on large-scale pre-training
Heng Cai, Chao Shen, Tianye Jian, et al.
Chemical Science (2023) Vol. 15, Iss. 4, pp. 1449-1471
Open Access | Times Cited: 15
Heng Cai, Chao Shen, Tianye Jian, et al.
Chemical Science (2023) Vol. 15, Iss. 4, pp. 1449-1471
Open Access | Times Cited: 15
MMSG-DTA: A Multimodal, Multiscale Model Based on Sequence and Graph Modalities for Drug-Target Affinity Prediction
Jiahao Xu, Lei Ci, Bo Zhu, et al.
Journal of Chemical Information and Modeling (2025)
Closed Access
Jiahao Xu, Lei Ci, Bo Zhu, et al.
Journal of Chemical Information and Modeling (2025)
Closed Access
Structural Bioinformatics for Rational Drug Design
Soroush Mozaffari, A. R. Moen, Chai‐Ann Ng, et al.
Research and Practice in Thrombosis and Haemostasis (2025) Vol. 9, Iss. 1, pp. 102691-102691
Open Access
Soroush Mozaffari, A. R. Moen, Chai‐Ann Ng, et al.
Research and Practice in Thrombosis and Haemostasis (2025) Vol. 9, Iss. 1, pp. 102691-102691
Open Access
Comprehensive Molecular Docking on the AlphaFold-Predicted Protein Structure Proteome: Identifying Target Protein Candidates for Puberulic Acid, a Suspected Lethal Nephrotoxin
T. Hayama, Retsu Sugawara, Ryo Kamata, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
T. Hayama, Retsu Sugawara, Ryo Kamata, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Molecular optimization using a conditional transformer for reaction-aware compound exploration with reinforcement learning
Shōgo Nakamura, Nobuaki Yasuo, Masakazu Sekijima
Communications Chemistry (2025) Vol. 8, Iss. 1
Open Access
Shōgo Nakamura, Nobuaki Yasuo, Masakazu Sekijima
Communications Chemistry (2025) Vol. 8, Iss. 1
Open Access
A Hybrid Energy-Based and AI-Based Screening Approach for the Discovery of Novel Inhibitors of AXL
Xinting Lv, Youkun Kang, Xinglong Chi, et al.
ACS Medicinal Chemistry Letters (2025) Vol. 16, Iss. 3, pp. 410-419
Closed Access
Xinting Lv, Youkun Kang, Xinglong Chi, et al.
ACS Medicinal Chemistry Letters (2025) Vol. 16, Iss. 3, pp. 410-419
Closed Access
PDAI: A green pesticide molecule design technology platform driven by high-performance computing and artificial intelligence
Z. A. Zhu, Mengzhu Jia, Xiuli Hou, et al.
Advanced Agrochem (2025)
Open Access
Z. A. Zhu, Mengzhu Jia, Xiuli Hou, et al.
Advanced Agrochem (2025)
Open Access
Identification of CXCR4 inhibitory activity in natural compounds using cheminformatics-guided machine learning algorithms
Rahul Tripathi, Pravir Kumar
Integrative Biology (2025) Vol. 17
Closed Access
Rahul Tripathi, Pravir Kumar
Integrative Biology (2025) Vol. 17
Closed Access
Discovery of Novel DDR1 Inhibitors through a Hybrid Virtual Screening Pipeline, Biological Evaluation and Molecular Dynamics Simulations
Xinglong Chi, Roufen Chen, Xiaoxiao Yang, et al.
ACS Medicinal Chemistry Letters (2025) Vol. 16, Iss. 4, pp. 602-610
Open Access
Xinglong Chi, Roufen Chen, Xiaoxiao Yang, et al.
ACS Medicinal Chemistry Letters (2025) Vol. 16, Iss. 4, pp. 602-610
Open Access
A conserved terpene cyclase gene in Sanghuangporus for abscisic acid-related sesquiterpenoid biosynthesis
Yoonhee Cho, Chang Wan Seo, Hyun Jin Cho, et al.
BMC Genomics (2025) Vol. 26, Iss. 1
Open Access
Yoonhee Cho, Chang Wan Seo, Hyun Jin Cho, et al.
BMC Genomics (2025) Vol. 26, Iss. 1
Open Access
Imaging Peripheral Nerves In Vivo with CT Neurogram Using Novel 2,4,6-Tri-Iodinated Lidocaine Contrast Agent
Rui Tang, Ramiro Perez, David M. Brogan, et al.
Bioengineering (2025) Vol. 12, Iss. 4, pp. 422-422
Open Access
Rui Tang, Ramiro Perez, David M. Brogan, et al.
Bioengineering (2025) Vol. 12, Iss. 4, pp. 422-422
Open Access
Improving the Hit Rates of Virtual Screening by Active Learning from Bioactivity Feedback
Xun Deng, Junlong Liu, Zhike Liu, et al.
Journal of Chemical Theory and Computation (2025)
Closed Access
Xun Deng, Junlong Liu, Zhike Liu, et al.
Journal of Chemical Theory and Computation (2025)
Closed Access
Docking and other computing tools in drug design against SARS-CoV-2
А.В. Сулимов, Ivan Ilin, Anna Tashchilova, et al.
SAR and QSAR in environmental research (2024) Vol. 35, Iss. 2, pp. 91-136
Closed Access | Times Cited: 3
А.В. Сулимов, Ivan Ilin, Anna Tashchilova, et al.
SAR and QSAR in environmental research (2024) Vol. 35, Iss. 2, pp. 91-136
Closed Access | Times Cited: 3
Calcium-Alginate-Chitosan Nanoparticle as a Potential Solution for Pesticide Removal, a Computational Approach
Osvaldo Yáñez, Melissa Alegría‐Arcos, Reynier Suardíaz, et al.
Polymers (2023) Vol. 15, Iss. 14, pp. 3020-3020
Open Access | Times Cited: 8
Osvaldo Yáñez, Melissa Alegría‐Arcos, Reynier Suardíaz, et al.
Polymers (2023) Vol. 15, Iss. 14, pp. 3020-3020
Open Access | Times Cited: 8
In Silico Design of Potential Small-Molecule Antibiotic Adjuvants against Salmonella typhimurium Ortho Acetyl Sulphydrylase Synthase to Address Antimicrobial Resistance
Oluwadunni F. Elebiju, Gbolahan O. Oduselu, Temitope A. Ogunnupebi, et al.
Pharmaceuticals (2024) Vol. 17, Iss. 5, pp. 543-543
Open Access | Times Cited: 2
Oluwadunni F. Elebiju, Gbolahan O. Oduselu, Temitope A. Ogunnupebi, et al.
Pharmaceuticals (2024) Vol. 17, Iss. 5, pp. 543-543
Open Access | Times Cited: 2
Recent advances in computational and experimental protein-ligand affinity determination techniques
Visvaldas Kairys, Lina Baranauskienė, Migle Kazlauskiene, et al.
Expert Opinion on Drug Discovery (2024) Vol. 19, Iss. 6, pp. 649-670
Closed Access | Times Cited: 2
Visvaldas Kairys, Lina Baranauskienė, Migle Kazlauskiene, et al.
Expert Opinion on Drug Discovery (2024) Vol. 19, Iss. 6, pp. 649-670
Closed Access | Times Cited: 2
Molecular design, construction and analgesic mechanism insights into the novel transdermal fusion peptide ANTP-BgNPB
Xinmeng Peng, Han Tao, Fengyan Xia, et al.
Bioorganic Chemistry (2024) Vol. 148, pp. 107482-107482
Closed Access | Times Cited: 2
Xinmeng Peng, Han Tao, Fengyan Xia, et al.
Bioorganic Chemistry (2024) Vol. 148, pp. 107482-107482
Closed Access | Times Cited: 2
Exploring Natural Compounds as Potential MAO-B Inhibitors for Parkinson's Disease Treatment: Insights from Docking Simulations and Toxicity Predictions
Ivan Vito Ferrari
(2024)
Open Access | Times Cited: 1
Ivan Vito Ferrari
(2024)
Open Access | Times Cited: 1
Docking-informed machine learning for kinome wide affinity prediction
Jordy Schifferstein, Andrius Bernatavicius, Antonius P. A. Janssen
(2024)
Open Access | Times Cited: 1
Jordy Schifferstein, Andrius Bernatavicius, Antonius P. A. Janssen
(2024)
Open Access | Times Cited: 1
Integrating Transformers and Many-Objective Optimization for Cancer Drug Design
Nicholas Aksamit, Jinqiang Hou, Yifeng Li, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 1
Nicholas Aksamit, Jinqiang Hou, Yifeng Li, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 1