OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
OpenMSCG: A Software Tool for Bottom-Up Coarse-Graining
Yuxing Peng, Alexander J. Pak, Aleksander E. P. Durumeric, et al.
The Journal of Physical Chemistry B (2023) Vol. 127, Iss. 40, pp. 8537-8550
Open Access | Times Cited: 32
Yuxing Peng, Alexander J. Pak, Aleksander E. P. Durumeric, et al.
The Journal of Physical Chemistry B (2023) Vol. 127, Iss. 40, pp. 8537-8550
Open Access | Times Cited: 32
Showing 1-25 of 32 citing articles:
Bottom-up Coarse-Graining: Principles and Perspectives
Jaehyeok Jin, Alexander J. Pak, Aleksander E. P. Durumeric, et al.
Journal of Chemical Theory and Computation (2022) Vol. 18, Iss. 10, pp. 5759-5791
Open Access | Times Cited: 168
Jaehyeok Jin, Alexander J. Pak, Aleksander E. P. Durumeric, et al.
Journal of Chemical Theory and Computation (2022) Vol. 18, Iss. 10, pp. 5759-5791
Open Access | Times Cited: 168
Efficient and feasible biocatalysts: Strategies for enzyme improvement. A review
Samah Hashim Albayati, Nima Ghahremani Nezhad, Abdulrahman M Taki, et al.
International Journal of Biological Macromolecules (2024) Vol. 276, pp. 133978-133978
Closed Access | Times Cited: 10
Samah Hashim Albayati, Nima Ghahremani Nezhad, Abdulrahman M Taki, et al.
International Journal of Biological Macromolecules (2024) Vol. 276, pp. 133978-133978
Closed Access | Times Cited: 10
Introducing a force-matched united atom force field to explore larger spatiotemporal domains in molecular dynamics simulations of bitumen
Eli I. Assaf, Xueyan Liu, Peng Lin, et al.
Materials & Design (2024) Vol. 240, pp. 112831-112831
Open Access | Times Cited: 7
Eli I. Assaf, Xueyan Liu, Peng Lin, et al.
Materials & Design (2024) Vol. 240, pp. 112831-112831
Open Access | Times Cited: 7
There and back again: bridging meso- and nanoscales to understand lipid vesicle patterning
Julie Cornet, Nelly Coulonges, Weria Pezeshkian, et al.
Soft Matter (2024) Vol. 20, Iss. 25, pp. 4998-5013
Open Access | Times Cited: 4
Julie Cornet, Nelly Coulonges, Weria Pezeshkian, et al.
Soft Matter (2024) Vol. 20, Iss. 25, pp. 4998-5013
Open Access | Times Cited: 4
A Neural-Network-Based Mapping and Optimization Framework for High-Precision Coarse-Grained Simulation
Zhixuan Zhong, Lifeng Xu, Jian Jiang
Journal of Chemical Theory and Computation (2025)
Open Access
Zhixuan Zhong, Lifeng Xu, Jian Jiang
Journal of Chemical Theory and Computation (2025)
Open Access
Entropy-based methods for formulating bottom-up ultra-coarse-grained models
Patrick G. Sahrmann, Gregory A. Voth
The Journal of Chemical Physics (2025) Vol. 162, Iss. 4
Open Access
Patrick G. Sahrmann, Gregory A. Voth
The Journal of Chemical Physics (2025) Vol. 162, Iss. 4
Open Access
Understanding dynamics in coarse-grained models. V. Extension of coarse-grained dynamics theory to non-hard sphere systems
Jaehyeok Jin, Gregory A. Voth
The Journal of Chemical Physics (2025) Vol. 162, Iss. 12
Open Access
Jaehyeok Jin, Gregory A. Voth
The Journal of Chemical Physics (2025) Vol. 162, Iss. 12
Open Access
Toward Predictive Coarse-Grained Simulations of Biomolecular Condensates
Shuming Liu, Cong Wang, Bin Zhang
Biochemistry (2025)
Closed Access
Shuming Liu, Cong Wang, Bin Zhang
Biochemistry (2025)
Closed Access
A Hybrid Bottom-Up and Data-Driven Machine Learning Approach for Accurate Coarse-Graining of Large Molecular Complexes
Korbinian Liebl, Gregory A. Voth
Journal of Chemical Theory and Computation (2025)
Closed Access
Korbinian Liebl, Gregory A. Voth
Journal of Chemical Theory and Computation (2025)
Closed Access
QM/CG-MM: Systematic Embedding of Quantum Mechanical Systems in a Coarse-Grained Environment with Accurate Electrostatics
大明 齋藤, Alexander V. Mironenko, Gregory A. Voth
The Journal of Physical Chemistry A (2024)
Closed Access | Times Cited: 3
大明 齋藤, Alexander V. Mironenko, Gregory A. Voth
The Journal of Physical Chemistry A (2024)
Closed Access | Times Cited: 3
K-Means Clustering Coarse-Graining (KMC-CG): A Next Generation Methodology for Determining Optimal Coarse-Grained Mappings of Large Biomolecules
Jiangbo Wu, W C Xue, Gregory A. Voth
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 23, pp. 8987-8997
Open Access | Times Cited: 8
Jiangbo Wu, W C Xue, Gregory A. Voth
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 23, pp. 8987-8997
Open Access | Times Cited: 8
Computational Prediction of Coiled–Coil Protein Gelation Dynamics and Structure
Dustin Britton, Luc F. Christians, Chengliang Liu, et al.
Biomacromolecules (2023) Vol. 25, Iss. 1, pp. 258-271
Open Access | Times Cited: 8
Dustin Britton, Luc F. Christians, Chengliang Liu, et al.
Biomacromolecules (2023) Vol. 25, Iss. 1, pp. 258-271
Open Access | Times Cited: 8
Enhancing the Assembly Properties of Bottom-Up Coarse-Grained Phospholipids
Patrick G. Sahrmann, Gregory A. Voth
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 22, pp. 10235-10246
Closed Access | Times Cited: 2
Patrick G. Sahrmann, Gregory A. Voth
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 22, pp. 10235-10246
Closed Access | Times Cited: 2
Temperature-Transferable Coarse-Grained Models for Volumetric Properties of Poly(lactic Acid)
Chaofu Wu
The Journal of Physical Chemistry B (2023) Vol. 128, Iss. 1, pp. 358-370
Closed Access | Times Cited: 4
Chaofu Wu
The Journal of Physical Chemistry B (2023) Vol. 128, Iss. 1, pp. 358-370
Closed Access | Times Cited: 4
Maximum Entropy Theory of Multiscale Coarse-Graining via Matching Thermodynamic Forces: Application to a Molecular Crystal (TATB)
Sergei Izvekov, Matthew P. Kroonblawd, James P. Larentzos, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 12, pp. 2955-2971
Closed Access | Times Cited: 1
Sergei Izvekov, Matthew P. Kroonblawd, James P. Larentzos, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 12, pp. 2955-2971
Closed Access | Times Cited: 1
Hierarchical Framework for Predicting Entropies in Bottom-Up Coarse-Grained Models
Jaehyeok Jin, David R. Reichman
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 13, pp. 3182-3199
Open Access | Times Cited: 1
Jaehyeok Jin, David R. Reichman
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 13, pp. 3182-3199
Open Access | Times Cited: 1
Contributions of the individual domains of αIIbβ3 integrin to its extension: Insights from multiscale modeling
Onkar Joshi, Tomasz Skóra, Anna Yarema, et al.
Cytoskeleton (2024) Vol. 81, Iss. 8, pp. 393-408
Open Access | Times Cited: 1
Onkar Joshi, Tomasz Skóra, Anna Yarema, et al.
Cytoskeleton (2024) Vol. 81, Iss. 8, pp. 393-408
Open Access | Times Cited: 1
Making the cut: Multiscale simulation of membrane remodeling
Jeriann Beiter, Gregory A. Voth
Current Opinion in Structural Biology (2024) Vol. 87, pp. 102831-102831
Closed Access | Times Cited: 1
Jeriann Beiter, Gregory A. Voth
Current Opinion in Structural Biology (2024) Vol. 87, pp. 102831-102831
Closed Access | Times Cited: 1
VOTCA: multiscale frameworks for quantum and classical simulations in soft matter
Björn Baumeier, Jens Wehner, Nicolas Renaud, et al.
The Journal of Open Source Software (2024) Vol. 9, Iss. 99, pp. 6864-6864
Open Access | Times Cited: 1
Björn Baumeier, Jens Wehner, Nicolas Renaud, et al.
The Journal of Open Source Software (2024) Vol. 9, Iss. 99, pp. 6864-6864
Open Access | Times Cited: 1
Megamolecule Self-Assembly Networks: A Combined Computational and Experimental Design Strategy
Jiangbo Wu, Zhaoyi Gu, Justin A. Modica, et al.
Journal of the American Chemical Society (2024) Vol. 146, Iss. 44, pp. 30553-30564
Closed Access | Times Cited: 1
Jiangbo Wu, Zhaoyi Gu, Justin A. Modica, et al.
Journal of the American Chemical Society (2024) Vol. 146, Iss. 44, pp. 30553-30564
Closed Access | Times Cited: 1
Thermodynamic Transferability in Coarse-Grained Force Fields Using Graph Neural Networks
Emily Shinkle, Aleksandra Pachalieva, Riti Bahl, et al.
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 23, pp. 10524-10539
Open Access | Times Cited: 1
Emily Shinkle, Aleksandra Pachalieva, Riti Bahl, et al.
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 23, pp. 10524-10539
Open Access | Times Cited: 1
Gaussian representation of coarse-grained interactions of liquids: Theory, parametrization, and transferability
Jaehyeok Jin, Jisung Hwang, Gregory A. Voth
The Journal of Chemical Physics (2023) Vol. 159, Iss. 18
Closed Access | Times Cited: 3
Jaehyeok Jin, Jisung Hwang, Gregory A. Voth
The Journal of Chemical Physics (2023) Vol. 159, Iss. 18
Closed Access | Times Cited: 3
Can a coarse-grained water model capture the key physical features of the hydrophobic effect?
Kuntal Ghosh, Timothy D. Loose, Gregory A. Voth
The Journal of Chemical Physics (2023) Vol. 159, Iss. 22
Closed Access | Times Cited: 2
Kuntal Ghosh, Timothy D. Loose, Gregory A. Voth
The Journal of Chemical Physics (2023) Vol. 159, Iss. 22
Closed Access | Times Cited: 2
Perturbative Expansion in Reciprocal Space: Bridging Microscopic and Mesoscopic Descriptions of Molecular Interactions
Jaehyeok Jin, David R. Reichman
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 4, pp. 1061-1078
Open Access
Jaehyeok Jin, David R. Reichman
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 4, pp. 1061-1078
Open Access
Simulation of Linear and Cyclic Alkanes with Second-Order Møller–Plesset Perturbation Theory through Adaptive Force Matching
Alexei Nikitin, Feng Wang
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 12, pp. 5241-5249
Open Access
Alexei Nikitin, Feng Wang
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 12, pp. 5241-5249
Open Access
