OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Comparison of Protein Quantification in a Complex Background by DIA and TMT Workflows with Fixed Instrument Time
Jan Muntel, Joanna Kirkpatrick, Roland Bruderer, et al.
Journal of Proteome Research (2019) Vol. 18, Iss. 3, pp. 1340-1351
Closed Access | Times Cited: 138

Showing 1-25 of 138 citing articles:

Single-cell Proteomics: Progress and Prospects
Ryan Kelly
Molecular & Cellular Proteomics (2020) Vol. 19, Iss. 11, pp. 1739-1748
Open Access | Times Cited: 298

Increasing the throughput of sensitive proteomics by plexDIA
Jason Derks, Andrew Leduc, Georg Wallmann, et al.
Nature Biotechnology (2022) Vol. 41, Iss. 1, pp. 50-59
Open Access | Times Cited: 186

Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation
Ernesto Nakayasu, Marina Gritsenko, Paul Piehowski, et al.
Nature Protocols (2021) Vol. 16, Iss. 8, pp. 3737-3760
Open Access | Times Cited: 184

Multibatch TMT Reveals False Positives, Batch Effects and Missing Values
Alejandro J. Brenes, Jens Hukelmann, Dalila Bensaddek, et al.
Molecular & Cellular Proteomics (2019) Vol. 18, Iss. 10, pp. 1967-1980
Open Access | Times Cited: 180

Multiplexed single-cell proteomics using SCoPE2
Aleksandra A. Petelski, Emily H Emmott, Andrew Leduc, et al.
Nature Protocols (2021) Vol. 16, Iss. 12, pp. 5398-5425
Open Access | Times Cited: 180

Surpassing 10 000 identified and quantified proteins in a single run by optimizing current LC-MS instrumentation and data analysis strategy
Jan Muntel, Tejas Gandhi, Lynn Verbeke, et al.
Molecular Omics (2019) Vol. 15, Iss. 5, pp. 348-360
Open Access | Times Cited: 161

MSstatsTMT: Statistical Detection of Differentially Abundant Proteins in Experiments with Isobaric Labeling and Multiple Mixtures
Ting Huang, Meena Choi, Manuel Tzouros, et al.
Molecular & Cellular Proteomics (2020) Vol. 19, Iss. 10, pp. 1706-1723
Open Access | Times Cited: 139

Protein Contaminants Matter: Building Universal Protein Contaminant Libraries for DDA and DIA Proteomics
Ashley M. Frankenfield, Jiawei Ni, Mustafa Ahmed, et al.
Journal of Proteome Research (2022) Vol. 21, Iss. 9, pp. 2104-2113
Open Access | Times Cited: 133

An Introduction to Mass Spectrometry-Based Proteomics
Steven R. Shuken
Journal of Proteome Research (2023) Vol. 22, Iss. 7, pp. 2151-2171
Closed Access | Times Cited: 116

Advances in data‐independent acquisition mass spectrometry towards comprehensive digital proteome landscape
Reta Birhanu Kitata, Jhih‐Ci Yang, Yu‐Ju Chen
Mass Spectrometry Reviews (2022) Vol. 42, Iss. 6, pp. 2324-2348
Open Access | Times Cited: 97

The proteomic landscape of synaptic diversity across brain regions and cell types
Marc van Oostrum, Thomas M. Blok, Stefano L. Giandomenico, et al.
Cell (2023) Vol. 186, Iss. 24, pp. 5411-5427.e23
Open Access | Times Cited: 56

Instrumentation at the Leading Edge of Proteomics
Trenton M. Peters-Clarke, Joshua J. Coon, Nicholas M. Riley
Analytical Chemistry (2024) Vol. 96, Iss. 20, pp. 7976-8010
Closed Access | Times Cited: 24

Metaproteomics characterizes human gut microbiome function in colorectal cancer
Shuping Long, Yi Yang, Chengpin Shen, et al.
npj Biofilms and Microbiomes (2020) Vol. 6, Iss. 1
Open Access | Times Cited: 120

Diagnostics and correction of batch effects in large‐scale proteomic studies: a tutorial
Jelena Čuklina, Chloe H. Lee, Evan G. Williams, et al.
Molecular Systems Biology (2021) Vol. 17, Iss. 8
Open Access | Times Cited: 103

Enzymatic Dissociation Induces Transcriptional and Proteotype Bias in Brain Cell Populations
Daniele Mattei, Andranik Ivanov, Marc van Oostrum, et al.
International Journal of Molecular Sciences (2020) Vol. 21, Iss. 21, pp. 7944-7944
Open Access | Times Cited: 97

Impact of the Identification Strategy on the Reproducibility of the DDA and DIA Results
Carolina Fernández-Costa, Salvador Martínez‐Bartolomé, Daniel B. McClatchy, et al.
Journal of Proteome Research (2020) Vol. 19, Iss. 8, pp. 3153-3161
Open Access | Times Cited: 96

Region-Specific Proteome Changes of the Intestinal Epithelium during Aging and Dietary Restriction
Nadja Gebert, Chia‐Wei Cheng, Joanna Kirkpatrick, et al.
Cell Reports (2020) Vol. 31, Iss. 4, pp. 107565-107565
Open Access | Times Cited: 71

The rise of single‐cell proteomics
Claudia Ctortecka, Karl Mechtler
Analytical Science Advances (2021) Vol. 2, Iss. 3-4, pp. 84-94
Open Access | Times Cited: 64

Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota
Jinzhi Zhao, Yi Yang, Hua Xu, et al.
npj Biofilms and Microbiomes (2023) Vol. 9, Iss. 1
Open Access | Times Cited: 42

Comparison of Quantitative Mass Spectrometric Methods for Drug Target Identification by Thermal Proteome Profiling
Amy L. George, Frances R. Sidgwick, Jessica E. Watt, et al.
Journal of Proteome Research (2023) Vol. 22, Iss. 8, pp. 2629-2640
Open Access | Times Cited: 26

Data-Independent Acquisition: A Milestone and Prospect in Clinical Mass Spectrometry–Based Proteomics
Klemens Fröhlich, Matthias Fahrner, Eva Brombacher, et al.
Molecular & Cellular Proteomics (2024) Vol. 23, Iss. 8, pp. 100800-100800
Open Access | Times Cited: 15

Single-cell omics: experimental workflow, data analyses and applications
Fengying Sun, Haoyan Li, Dongqing Sun, et al.
Science China Life Sciences (2024)
Closed Access | Times Cited: 11

High-throughput drug target discovery using a fully automated proteomics sample preparation platform
Qiong Wu, Jiangnan Zheng, Xintong Sui, et al.
Chemical Science (2024) Vol. 15, Iss. 8, pp. 2833-2847
Open Access | Times Cited: 10

Structural Dynamics of the Ubiquitin Specific Protease USP30 in Complex with a Cyanopyrrolidine-Containing Covalent Inhibitor
Darragh P. O’Brien, Hannah B. L. Jones, Yuqi Shi, et al.
Journal of Proteome Research (2025) Vol. 24, Iss. 2, pp. 479-490
Open Access | Times Cited: 1

Optimized Workflow for Multiplexed Phosphorylation Analysis of TMT-Labeled Peptides Using High-Field Asymmetric Waveform Ion Mobility Spectrometry
Devin K. Schweppe, Scott Rusin, Steven P. Gygi, et al.
Journal of Proteome Research (2019) Vol. 19, Iss. 1, pp. 554-560
Open Access | Times Cited: 68

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