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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease
H. T. Henry Chan, A. Sofia F. Oliveira, Christopher J. Schofield, et al.
JACS Au (2023) Vol. 3, Iss. 6, pp. 1767-1774
Open Access | Times Cited: 30

Showing 1-25 of 30 citing articles:

Protein dynamics underlying allosteric regulation
Miro A. Astore, Akshada S. Pradhan, Erik H. Thiede, et al.
Current Opinion in Structural Biology (2024) Vol. 84, pp. 102768-102768
Open Access | Times Cited: 19
Decrypting Allostery in Membrane-Bound K-Ras4B Using Complementary In Silico Approaches Based on Unbiased Molecular Dynamics Simulations
Matteo Castelli, Filippo Marchetti, Sílvia Osuna, et al.
Journal of the American Chemical Society (2023) Vol. 146, Iss. 1, pp. 901-919
Open Access | Times Cited: 23
Signal Propagation in the ATPase Domain of Mycobacterium tuberculosis DNA Gyrase from Dynamical-Nonequilibrium Molecular Dynamics Simulations
Bundit Kamsri, Pharit Kamsri, Auradee Punkvang, et al.
Biochemistry (2024) Vol. 63, Iss. 11, pp. 1493-1504
Open Access | Times Cited: 5
New Insights into the Cooperativity and Dynamics of Dimeric Enzymes
Ke-Wei Chen, Tian‐Yu Sun, Yun‐Dong Wu
Chemical Reviews (2023) Vol. 123, Iss. 16, pp. 9940-9981
Closed Access | Times Cited: 12
Dynamical Responses Predict a Distal Site that Modulates Activity in an Antibiotic Resistance Enzyme
Michael Beer, A. Sofia F. Oliveira, Catherine L. Tooke, et al.
Chemical Science (2024)
Open Access | Times Cited: 4
Advances in the Simulations of Enzyme Reactivity in the Dawn of the Artificial Intelligence Age
Katarzyna Świderek, J. Bertrán, Kirill Zinovjev, et al.
Wiley Interdisciplinary Reviews Computational Molecular Science (2025) Vol. 15, Iss. 1
Open Access
Identification and Understanding of Allostery Hotspots in Proteins: Integration of Deep Mutational Scanning and Multi-faceted Computational Analyses
Qiang Cui
Journal of Molecular Biology (2025), pp. 168998-168998
Closed Access
Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike
A. Sofia F. Oliveira, Fiona L. Kearns, Mia A. Rosenfeld, et al.
(2025)
Open Access
A Reflection on the Use of Molecular Simulation to Respond to SARS-CoV-2 Pandemic Threats
Lorenzo Casalino, Carlos A. Ramos‐Guzmán, Rommie E. Amaro, et al.
The Journal of Physical Chemistry Letters (2025), pp. 3249-3263
Open Access
Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike
A. Sofia F. Oliveira, Fiona L. Kearns, Mia A. Rosenfeld, et al.
eLife (2025) Vol. 13
Open Access
An allosteric mechanism for potent inhibition of SARS-CoV-2 main proteinase
Yunju Zhang, Jingjing Guo, Yang Liu, et al.
International Journal of Biological Macromolecules (2024) Vol. 265, pp. 130644-130644
Closed Access | Times Cited: 3
Allostery in homodimeric SARS-CoV-2 main protease
Emanuele Fornasier, Simone Fabbian, Haidi Shehi, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 3
Exploring the Allosteric Response of Fascin to Its Inhibitor
Jinmei Pan, Kai Chen, Lirui Lin, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 49, pp. 12050-12058
Closed Access | Times Cited: 3
Molecular Dynamics‐Assisted Interaction Between HABT and PI3K Enzyme: Exploring Metastable States for Promising Cancer Diagnosis Applications
Rodrigo Mancini Santos, Teodorico C. Ramalho
Journal of Computational Chemistry (2025) Vol. 46, Iss. 8
Open Access
Subpocket-Based Analysis Approach for the Protein Pocket Dynamics
Nan Lv, Zexing Cao
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 11, pp. 4909-4920
Closed Access | Times Cited: 2
A Computational Comparison Between Pomotrelvir and Nirmatrelvir Binding and Reactivity with SARS-CoV-2 Main Protease. Implications for Resistance Mechanisms
Johanna Schillings, Carlos A. Ramos‐Guzmán, J. Javier Ruiz‐Pernía, et al.
(2024)
Open Access | Times Cited: 1
Pomotrelvir and Nirmatrelvir Binding and Reactivity with SARS‐CoV‐2 Main Protease: Implications for Resistance Mechanisms from Computations
Johanna Schillings, Carlos A. Ramos‐Guzmán, J. Javier Ruiz‐Pernía, et al.
Angewandte Chemie International Edition (2024)
Open Access | Times Cited: 1
Mechanistic Insights into the Mutational Landscape of the Main Protease/3CLPro and Its Impact on Long-Term COVID-19/SARS-CoV-2 Management
Aganze Gloire-Aimé Mushebenge, Samuel Chima Ugbaja, Nonjabulo Ntombikhona Magwaza, et al.
(2024)
Open Access | Times Cited: 1
Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike
A. Sofia F. Oliveira, Fiona L. Kearns, Mia A. Rosenfeld, et al.
eLife (2024)
Open Access | Times Cited: 1
Mass spectrometric assays monitoring the deubiquitinase activity of the SARS-CoV-2 papain-like protease inform on the basis of substrate selectivity and have utility for substrate identification
Lennart Brewitz, H. T. Henry Chan, Petra Lukacik, et al.
Bioorganic & Medicinal Chemistry (2023) Vol. 95, pp. 117498-117498
Open Access | Times Cited: 2
Surface Modification Engineering of Graphene for Enhanced Trapping and Disruptive Interaction with Sars-Cov-2 3cl Mpro
Jiawen Wang, Yi Yu, Huilong Dong, et al.
(2024)
Closed Access
Pomotrelvir and Nirmatrelvir Binding and Reactivity with SARS‐CoV‐2 Main Protease: Implications for Resistance Mechanisms from Computations
Johanna Schillings, Carlos A. Ramos‐Guzmán, J. Javier Ruiz‐Pernía, et al.
Angewandte Chemie (2024) Vol. 136, Iss. 40
Open Access
eLife assessment: Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike
Volker Dötsch
(2024)
Open Access
Reviewer #2 (Public Review): Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike

(2024)
Open Access
Reviewer #3 (Public Review): Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike

(2024)
Open Access
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