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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing
Bo Wang, Elizabeth Tseng, Michael Regulski, et al.
Nature Communications (2016) Vol. 7, Iss. 1
Open Access | Times Cited: 548

Showing 1-25 of 548 citing articles:

Transcriptome assembly from long-read RNA-seq alignments with StringTie2
Sam Kovaka, Aleksey V. Zimin, Geo Pertea, et al.
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 1369
Improved maize reference genome with single-molecule technologies
Yinping Jiao, Paul Peluso, Jinghua Shi, et al.
Nature (2017) Vol. 546, Iss. 7659, pp. 524-527
Open Access | Times Cited: 1135
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome
Chia‐Yi Cheng, Vivek Krishnakumar, Agnes P. Chan, et al.
The Plant Journal (2016) Vol. 89, Iss. 4, pp. 789-804
Open Access | Times Cited: 1100
The Third Revolution in Sequencing Technology
Erwin L. van Dijk, Yan Jaszczyszyn, Delphine Naquin, et al.
Trends in Genetics (2018) Vol. 34, Iss. 9, pp. 666-681
Closed Access | Times Cited: 958
Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
Yan Hu, Jiedan Chen, Lei Fang, et al.
Nature Genetics (2019) Vol. 51, Iss. 4, pp. 739-748
Open Access | Times Cited: 815
Piercing the dark matter: bioinformatics of long-range sequencing and mapping
Fritz J. Sedlazeck, Hayan Lee, Charlotte A. Darby, et al.
Nature Reviews Genetics (2018) Vol. 19, Iss. 6, pp. 329-346
Closed Access | Times Cited: 495
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
Matthew B. Hufford, Arun S. Seetharam, Margaret Woodhouse, et al.
Science (2021) Vol. 373, Iss. 6555, pp. 655-662
Open Access | Times Cited: 481
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
Manuel Tardáguila, Lorena de la Fuente, Cristina Martí, et al.
Genome Research (2018) Vol. 28, Iss. 3, pp. 396-411
Open Access | Times Cited: 397
Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes
Silong Sun, Yingsi Zhou, Jian Chen, et al.
Nature Genetics (2018) Vol. 50, Iss. 9, pp. 1289-1295
Open Access | Times Cited: 360
Long reads: their purpose and place
Martin Pollard, Deepti Gurdasani, Alexander J. Mentzer, et al.
Human Molecular Genetics (2018) Vol. 27, Iss. R2, pp. R234-R241
Open Access | Times Cited: 318
Chromosome-level reference genome and alternative splicing atlas of moso bamboo (Phyllostachys edulis)
Hansheng Zhao, Zhimin Gao, Le Wang, et al.
GigaScience (2018) Vol. 7, Iss. 10
Open Access | Times Cited: 215
The maize W22 genome provides a foundation for functional genomics and transposon biology
Nathan M. Springer, Sarah N. Anderson, Carson M. Andorf, et al.
Nature Genetics (2018) Vol. 50, Iss. 9, pp. 1282-1288
Open Access | Times Cited: 214
A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing
Nam V. Hoang, Agnelo Furtado, Patrick J. Mason, et al.
BMC Genomics (2017) Vol. 18, Iss. 1
Open Access | Times Cited: 185
Comprehensive profiling of rhizome‐associated alternative splicing and alternative polyadenylation in moso bamboo (Phyllostachys edulis)
Taotao Wang, Huiyuan Wang, Dawei Cai, et al.
The Plant Journal (2017) Vol. 91, Iss. 4, pp. 684-699
Open Access | Times Cited: 180
Gramene 2018: unifying comparative genomics and pathway resources for plant research
Marcela K. Tello‐Ruiz, Sushma Naithani, Joshua C. Stein, et al.
Nucleic Acids Research (2017) Vol. 46, Iss. D1, pp. D1181-D1189
Open Access | Times Cited: 174
Ethylene mediates the branching of the jasmonate‐induced flavonoid biosynthesis pathway by suppressing anthocyanin biosynthesis in red Chinese pear fruits
Junbei Ni, Yuan Zhao, Ruiyan Tao, et al.
Plant Biotechnology Journal (2019) Vol. 18, Iss. 5, pp. 1223-1240
Open Access | Times Cited: 154
A technology-agnostic long-read analysis pipeline for transcriptome discovery and quantification
Dana Wyman, Gabriela Balderrama-Gutierrez, Fairlie Reese, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2019)
Open Access | Times Cited: 153
Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing
Liangzhen Zhao, Hangxiao Zhang, Markus V. Kohnen, et al.
Frontiers in Genetics (2019) Vol. 10
Open Access | Times Cited: 151
The changing paradigm of intron retention: regulation, ramifications and recipes
Geoffray Monteuuis, Justin Wong, Charles G. Bailey, et al.
Nucleic Acids Research (2019)
Open Access | Times Cited: 147
Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing
Szi Kay Leung, Aaron R. Jeffries, Isabel Castanho, et al.
Cell Reports (2021) Vol. 37, Iss. 7, pp. 110022-110022
Open Access | Times Cited: 124
Ultra-accurate microbial amplicon sequencing with synthetic long reads
Benjamin J. Callahan, Dmitry O. Grinevich, Siddhartha Thakur, et al.
Microbiome (2021) Vol. 9, Iss. 1
Open Access | Times Cited: 105
Gene Body Methylation in Plants: Mechanisms, Functions, and Important Implications for Understanding Evolutionary Processes
Aline Muyle, Danelle K. Seymour, Yuanda Lv, et al.
Genome Biology and Evolution (2022) Vol. 14, Iss. 4
Open Access | Times Cited: 80
Upcoming progress of transcriptomics studies on plants: An overview
Parul Tyagi, Deeksha Singh, Shivangi Mathur, et al.
Frontiers in Plant Science (2022) Vol. 13
Open Access | Times Cited: 70
Small and long non-coding RNAs: Past, present, and future
Ling‐Ling Chen, V. Narry Kim
Cell (2024) Vol. 187, Iss. 23, pp. 6451-6485
Closed Access | Times Cited: 36
A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation
Maojun Wang, Pengcheng Wang, Fan Liang, et al.
New Phytologist (2017) Vol. 217, Iss. 1, pp. 163-178
Open Access | Times Cited: 168
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