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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Quantitative and logic modelling of molecular and gene networks
Nicolas Le Novère
Nature Reviews Genetics (2015) Vol. 16, Iss. 3, pp. 146-158
Open Access | Times Cited: 435

Showing 1-25 of 435 citing articles:

Non-coding RNA regulatory networks
Simona Panni, Ruth C. Lovering, Pablo Porras, et al.
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms (2019) Vol. 1863, Iss. 6, pp. 194417-194417
Open Access | Times Cited: 394
Parameter estimation in large-scale systems biology models: a parallel and self-adaptive cooperative strategy
David R. Penas, Patricia González, José A. Egea, et al.
BMC Bioinformatics (2017) Vol. 18, Iss. 1
Open Access | Times Cited: 353
BioModels—15 years of sharing computational models in life science
Rahuman S. Malik‐Sheriff, Mihai Glont, Tung V N Nguyen, et al.
Nucleic Acids Research (2019)
Open Access | Times Cited: 322
Genome Editing: Targeting Susceptibility Genes for Plant Disease Resistance
Syed Shan‐e‐Ali Zaidi, M. Shahid Mukhtar, Shahid Mansoor
Trends in biotechnology (2018) Vol. 36, Iss. 9, pp. 898-906
Open Access | Times Cited: 275
SIGNOR: a database of causal relationships between biological entities
Livia Perfetto, Leonardo Briganti, Alberto Calderone, et al.
Nucleic Acids Research (2015) Vol. 44, Iss. D1, pp. D548-D554
Open Access | Times Cited: 255
Logical Modeling and Dynamical Analysis of Cellular Networks
Wassim Abou-Jaoudé, Pauline Traynard, Pedro T. Monteiro, et al.
Frontiers in Genetics (2016) Vol. 7
Open Access | Times Cited: 219
From the exposome to mechanistic understanding of chemical-induced adverse effects
Beate I. Escher, Jörg Hackermüller, Tobias Polte, et al.
Environment International (2016) Vol. 99, pp. 97-106
Open Access | Times Cited: 186
Understanding microRNA-mediated gene regulatory networks through mathematical modelling
Xin Lai, Olaf Wolkenhauer, Julio Vera
Nucleic Acids Research (2016) Vol. 44, Iss. 13, pp. 6019-6035
Open Access | Times Cited: 170
Building digital twins of the human immune system: toward a roadmap
Reinhard Laubenbacher, Anna Niarakis, Tomáš Helikar, et al.
npj Digital Medicine (2022) Vol. 5, Iss. 1
Open Access | Times Cited: 96
Patient-specific Boolean models of signalling networks guide personalised treatments
Arnau Montagud, Jonas Béal, Luis Tobalina, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 74
Current and future directions in network biology
Marinka Žitnik, Michelle M. Li, A. V. Wells, et al.
Bioinformatics Advances (2024) Vol. 4, Iss. 1
Open Access | Times Cited: 21
Robust and efficient parameter estimation in dynamic models of biological systems
Attila Gábor, Julio R. Banga
BMC Systems Biology (2015) Vol. 9, Iss. 1
Open Access | Times Cited: 155
Connectivity and complex systems: learning from a multi-disciplinary perspective
Laura Turnbull, Marc-Thorsten Hütt, Andreas A. Ioannides, et al.
Applied Network Science (2018) Vol. 3, Iss. 1
Open Access | Times Cited: 150
High-throughput mathematical analysis identifies Turing networks for patterning with equally diffusing signals
Luciano Marcon, Xavier Diego, James Sharpe, et al.
eLife (2016) Vol. 5
Open Access | Times Cited: 144
Genes and networks regulating root anatomy and architecture
Guy Wachsman, Erin E. Sparks, Philip N. Benfey
New Phytologist (2015) Vol. 208, Iss. 1, pp. 26-38
Open Access | Times Cited: 134
Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling
Åsmund Flobak, Anaı̈s Baudot, Élisabeth Rémy, et al.
PLoS Computational Biology (2015) Vol. 11, Iss. 8, pp. e1004426-e1004426
Open Access | Times Cited: 119
Systems Bioinformatics: increasing precision of computational diagnostics and therapeutics through network-based approaches
Anastasis Oulas, George Minadakis, Margarita Zachariou, et al.
Briefings in Bioinformatics (2017) Vol. 20, Iss. 3, pp. 806-824
Open Access | Times Cited: 117
CRISPR/Cas9‐mediated genome engineering of CHO cell factories: Application and perspectives
Jae Seong Lee, Lise Marie Grav, Nathan E. Lewis, et al.
Biotechnology Journal (2015) Vol. 10, Iss. 7, pp. 979-994
Open Access | Times Cited: 113
Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms
Alexander Mazein, Marek Ostaszewski, Inna Kuperstein, et al.
npj Systems Biology and Applications (2018) Vol. 4, Iss. 1
Open Access | Times Cited: 106
PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling
Gaëlle Letort, Arnau Montagud, Gautier Stoll, et al.
Bioinformatics (2018) Vol. 35, Iss. 7, pp. 1188-1196
Open Access | Times Cited: 106
Advances on plant–pathogen interactions from molecular toward systems biology perspectives
Rémi Peyraud, Ullrich Dubiella, Adelin Barbacci, et al.
The Plant Journal (2016) Vol. 90, Iss. 4, pp. 720-737
Open Access | Times Cited: 105
Reproducibility in systems biology modelling
Krishna Kumar Tiwari, Sarubini Kananathan, Matthew Roberts, et al.
Molecular Systems Biology (2021) Vol. 17, Iss. 2
Open Access | Times Cited: 102
Metabolic Engineering and Synthetic Biology: Synergies, Future, and Challenges
Raúl García-Granados, Jordy Alexis Lerma-Escalera, José Rubén Morones‐Ramírez
Frontiers in Bioengineering and Biotechnology (2019) Vol. 7
Open Access | Times Cited: 95
Systems Biology and Machine Learning in Plant–Pathogen Interactions
Bharat Mishra, Nilesh Kumar, M. Shahid Mukhtar
Molecular Plant-Microbe Interactions (2018) Vol. 32, Iss. 1, pp. 45-55
Open Access | Times Cited: 93
How to deal with parameters for whole-cell modelling
Ann C. Babtie, Michael P. H. Stumpf
Journal of The Royal Society Interface (2017) Vol. 14, Iss. 133, pp. 20170237-20170237
Open Access | Times Cited: 90
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