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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Protein complex prediction using Rosetta, AlphaFold, and mass spectrometry covalent labeling
Zachary C. Drake, Justin T. Seffernick, Steffen Lindert
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 43

Showing 1-25 of 43 citing articles:

A DNA tetrahedron-based ferroptosis-suppressing nanoparticle: superior delivery of curcumin and alleviation of diabetic osteoporosis
Yong Li, Zhengwen Cai, Wenjuan Ma, et al.
Bone Research (2024) Vol. 12, Iss. 1
Open Access | Times Cited: 74
Multiscale photocatalytic proximity labeling reveals cell surface neighbors on and between cells
Zhi Lin, Kaitlin Schaefer, Irene Lui, et al.
Science (2024) Vol. 385, Iss. 6706
Open Access | Times Cited: 24
Using AlphaFold Predictions in Viral Research
Daria Gutnik, Peter V. Evseev, Konstantin A. Miroshnikov, et al.
Current Issues in Molecular Biology (2023) Vol. 45, Iss. 4, pp. 3705-3732
Open Access | Times Cited: 23
Recent Advances in NMR Protein Structure Prediction with ROSETTA
Julia Koehler Leman, Georg Künze
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 9, pp. 7835-7835
Open Access | Times Cited: 23
Overview of AlphaFold2 and breakthroughs in overcoming its limitations
Lei Wang, Zehua Wen, Shiwei Liu, et al.
Computers in Biology and Medicine (2024) Vol. 176, pp. 108620-108620
Closed Access | Times Cited: 13
Experimental Evidence for Phosphorylation-Driven Allosteric Regulation of Alpha Synuclein Function
Ashlyn N. Dollar, Ian Webb
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access | Times Cited: 1
Leveraging AlphaFold Models to Predict Androgenic Effects of Endocrine-Disrupting Chemicals Through Zebrafish Androgen Receptor Analysis
Md. Adnan Karim, Chang Gyun Park, Hyunki Cho, et al.
Toxicology Mechanisms and Methods (2025), pp. 1-19
Closed Access | Times Cited: 1
Integrated structure prediction of protein–protein docking with experimental restraints using ColabDock
Shi-Hao Feng, Zhen‐Yu Chen, Chengwei Zhang, et al.
Nature Machine Intelligence (2024) Vol. 6, Iss. 8, pp. 924-935
Closed Access | Times Cited: 8
Recent Advances and Challenges in Protein Structure Prediction
Chunxiang Peng, Liang Fang, Yuhao Xia, et al.
Journal of Chemical Information and Modeling (2023) Vol. 64, Iss. 1, pp. 76-95
Closed Access | Times Cited: 16
RosettaHDX: Predicting antibody-antigen interaction from hydrogen-deuterium exchange mass spectrometry data
Minh H. Tran, Cristina E. Martina, Rocco Moretti, et al.
Journal of Structural Biology (2025) Vol. 217, Iss. 1, pp. 108166-108166
Closed Access
Omics Approaches to Drug and Drug-Non-Drug Interactions
Angela Adamski da Silva Reis, Rodrigo da Silva Santos
(2025), pp. 261-290
Closed Access
Determining T-cell Receptor Binding Orientation and Peptide-HLA Interactions Using Cross-Linking Mass Spectrometry
Thomas Powell, V. Karuppiah, Saher A. Shaikh, et al.
Journal of Biological Chemistry (2025), pp. 108445-108445
Open Access
Strategies for Acid and Amine Cross-linking and Labeling for Protein Structural Characterization Using Mass Spectrometry
Ashlyn N. Dollar, Ian Webb
Analytical Chemistry (2025)
Closed Access
Sortilin‐Mediated Rapid, Precise and Sustained Degradation of Membrane Proteins via mRNA‐Encoded Lysosome‐Targeting Chimera
Xin Chang, Xinyu Qiu, Tong Xiang, et al.
Advanced Science (2025)
Open Access
Structure‐based computational design of antibody mimetics: challenges and perspectives
Elton José Ferreira Chaves, Danilo F. Côelho, Carlos Cruz, et al.
FEBS Open Bio (2024)
Open Access | Times Cited: 3
Mass Spectrometry Structural Proteomics Enabled by Limited Proteolysis and Cross‐Linking
Haiyan Lu, Zexin Zhu, Lauren Fields, et al.
Mass Spectrometry Reviews (2024)
Open Access | Times Cited: 3
Carotenoids: resources, knowledge, and emerging tools to advance apocarotenoid research
Jesús Beltrán, Eleanore T. Wurtzel
Plant Science (2024) Vol. 350, pp. 112298-112298
Closed Access | Times Cited: 3
Energy Resolved Mass Spectrometry Data from Surfaced Induced Dissociation Improves Prediction of Protein Complex Structure
Robert M. Bolz, Justin T. Seffernick, Zachary C. Drake, et al.
Analytical Chemistry (2025)
Closed Access
A multiscale functional map of somatic mutations in cancer integrating protein structure and network topology
Yingying Zhang, Alden King-Yung Leung, Jin Joo Kang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Revolutionizing structural biology: AI-driven protein structure prediction from AlphaFold to next-generation innovations
Mowna Sundari Thangamalai, Deepali Desai, Chandrabose Selvaraj
Advances in protein chemistry and structural biology (2025)
Closed Access
ColabDock: inverting AlphaFold structure prediction model for protein-protein docking with experimental restraints
Shi-Hao Feng, Zhen‐Yu Chen, Chengwei Zhang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 7
Prediction of protein structure and AI
Shiho Ohno, Noriyoshi Manabe, Yoshiki Yamaguchi
Journal of Human Genetics (2024) Vol. 69, Iss. 10, pp. 477-480
Closed Access | Times Cited: 2
Advancing Molecular Dynamics: Toward Standardization, Integration, and Data Accessibility in Structural Biology
Marcelo Caparotta, Alberto Pérez
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 10, pp. 2219-2227
Closed Access | Times Cited: 2
Structural determinants for activation of the Tau kinase CDK5 by the serotonin receptor 5-HT7R
Jana Ackmann, Alina Brüge, Lizaveta Gotina, et al.
Cell Communication and Signaling (2024) Vol. 22, Iss. 1
Open Access | Times Cited: 2
ZBTB11 Depletion Targets Metabolic Vulnerabilities in K-Ras Inhibitor Resistant PDAC
Nathan L. Tran, Jiewei Jiang, Min Ma, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
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