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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Design of target specific peptide inhibitors using generative deep learning and molecular dynamics simulations
Sijie Chen, Tong Lin, Ruchira Basu, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 86

Showing 1-25 of 86 citing articles:

Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides
Montserrat Goles, Anamaria Sanchez–Daza, Gabriel Cabas-Mora, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 4
Open Access | Times Cited: 30
Artificial intelligence in drug development
Kang Zhang, Xin Yang, Yifei Wang, et al.
Nature Medicine (2025) Vol. 31, Iss. 1, pp. 45-59
Closed Access | Times Cited: 17
Deep Generative Models for Therapeutic Peptide Discovery: A Comprehensive Review
Liangtao Lai, Yuansheng Liu, Bosheng Song, et al.
ACM Computing Surveys (2025)
Closed Access | Times Cited: 4
A Decade in a Systematic Review: The Evolution and Impact of Cell Painting
Srijit Seal, Maria‐Anna Trapotsi, Ola Spjuth, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 12
Koina: Democratizing machine learning for proteomics research
Ludwig Lautenbacher, Kevin Yang, Tobias Kockmann, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 9
Data and AI-driven synthetic binding protein discovery
Yanlin Li, Zixin Duan, Zhenwen Li, et al.
Trends in Pharmacological Sciences (2025)
Closed Access | Times Cited: 1
Direct RNA sequencing (RNA004) allows for improved transcriptome assessment and near real-time tracking of methylation for medical applications
Charlotte Hewel, Anna Wierczeiko, Johannes Miedema, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 6
Viral delivery of an RNA-guided genome editor for transgene-free plant germline editing
Trevor Weiss, Maris Kamalu, Honglue Shi, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 5
Diverse Genomic Embedding Benchmark for functional evaluation across the tree of life
Jacob West-Roberts, Joshua Kravitz, Nishant Jha, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access | Times Cited: 4
SeqTagger, a rapid and accurate tool to demultiplex direct RNA nanopore sequencing datasets
Leszek P. Pryszcz, Gregor Diensthuber, Laia Llovera, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
Peptide-based specific biosensors for bioanalysis of human health
Xiaoyu Qin, Xiangdong Cai, Jianxi Xiao
TrAC Trends in Analytical Chemistry (2025), pp. 118137-118137
Closed Access
Deciphering the Host-Pathogen Interface in COVID-19: The precision molecular insight into epitranscriptomic modifications of high-impact transcripts
Mateusz Maździarz, Katarzyna Krawczyk, Ewa Lepiarczyk, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Clonal relationships between Tph and Tfh cells in patients with SLE and in murine lupus
Takanori Sasaki, John M. Sowerby, Yuncai Xiao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Hierarchical Self‐Assembly of Short Peptides: Nanostructure Formation, Function Tailoring, and Applications
Liangchun Li, Renlin Zheng, Rongqin Sun
Macromolecular Bioscience (2025)
Closed Access
Unifying Genetic and Chemical Perturbagen Representation through a Hybrid Deep Learning Framework
Yiming Li, Jun Zhu, Linjing Liu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
De-novo DNA Methylation of Bivalent Promoters Induces Gene Activation through PRC2 Displacement
Henriette O’Geen, Alina Mihalovits, Brigid Brophy, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
Advances of deep Neural Networks (DNNs) in the development of peptide drugs
Yuzhen Niu, Pingyang Qin, Ping Lin
Future Medicinal Chemistry (2025), pp. 1-15
Closed Access
RNA-triggered fluorescence controlled by RNA switches for real-time RNA expression tracking in living plants
Jiuyuan Bai, Yazhou Chen, Jiayu Zhang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
Microenvironmental arginine restriction sensitizes pancreatic cancers to polyunsaturated fatty acids by suppression of lipid synthesis
Patrick B. Jonker, Mumina Sadullozoda, Guillaume Cognet, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Transcriptional stress induces the overexpression of novel lncRNAs that regulate the BRCA1 locus
Samantha Cruz-Ruiz, Raphael Vidal, Mayra Furlan‐Magaril, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
Main methods and tools for peptide development based on protein-protein interactions (PPIs).
Javiera Baeza, Mauricio Bedoya, Pablo Cruz, et al.
Biochemical and Biophysical Research Communications (2025), pp. 151623-151623
Closed Access
Cytosine-to-uracil RNA editing is upregulated by pro-inflammatory stimulation of myeloid cells
Hyomin Seo, Winston H. Cuddleston, Ting Fu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Taxonomically different symbiotic communities of sympatric Arctic sponge species show functional similarity with specialization at species level
Anastasiia Rusanova, Viktor Mamontov, Maxim Ri, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Deep learning in the discovery of antiviral peptides and peptidomimetics: databases and prediction tools
Maryam Nawaz, Yao Huiyuan, Fahad Akhtar, et al.
Molecular Diversity (2025)
Closed Access
Molecular Modelling in Bioactive Peptide Discovery and Characterisation
Clement Agoni, Raúl Fernández-Díaz, Patrick Brendan Timmons, et al.
Biomolecules (2025) Vol. 15, Iss. 4, pp. 524-524
Open Access
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