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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity
Justin P. Shaffer, Louis‐Félix Nothias, Luke Thompson, et al.
Nature Microbiology (2022) Vol. 7, Iss. 12, pp. 2128-2150
Open Access | Times Cited: 110

Showing 1-25 of 110 citing articles:

Greengenes2 unifies microbial data in a single reference tree
Daniel McDonald, Yueyu Jiang, Metin Balaban, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 5, pp. 715-718
Open Access | Times Cited: 197
Patterns in soil microbial diversity across Europe
Maëva Labouyrie, Cristiano Ballabio, Ferran Romero, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 142
Gut Microbiome–Brain Alliance: A Landscape View into Mental and Gastrointestinal Health and Disorders
Janet M. Sasso, Ramy M. Ammar, Rumiana Tenchov, et al.
ACS Chemical Neuroscience (2023) Vol. 14, Iss. 10, pp. 1717-1763
Open Access | Times Cited: 97
Soil metabolomics - current challenges and future perspectives
Robert W. Brown, Michaela Reay, Florian Centler, et al.
Soil Biology and Biochemistry (2024) Vol. 193, pp. 109382-109382
Open Access | Times Cited: 20
Contamination source modeling with SCRuB improves cancer phenotype prediction from microbiome data
George I. Austin, Heekuk Park, Yoli Meydan, et al.
Nature Biotechnology (2023) Vol. 41, Iss. 12, pp. 1820-1828
Open Access | Times Cited: 30
Scientists’ call to action: Microbes, planetary health, and the Sustainable Development Goals
Thomas W. Crowther, Rino Rappuoli, Cinzia Corinaldesi, et al.
Cell (2024) Vol. 187, Iss. 19, pp. 5195-5216
Open Access | Times Cited: 15
Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
Giovanni Andrea Vitale, Christian Geibel, Vidit Minda, et al.
Natural Product Reports (2024) Vol. 41, Iss. 6, pp. 885-904
Open Access | Times Cited: 11
Analytical challenges in omics research on asthma and allergy: A National Institute of Allergy and Infectious Diseases workshop
Supinda Bunyavanich, Patrice M. Becker, Matthew C. Altman, et al.
Journal of Allergy and Clinical Immunology (2024) Vol. 153, Iss. 4, pp. 954-968
Closed Access | Times Cited: 9
Unveiling the deterministic dynamics of microbial meta-metabolism: a multi-omics investigation of anaerobic biodegradation
Xingsheng Yang, Kai Feng, Shang Wang, et al.
Microbiome (2024) Vol. 12, Iss. 1
Open Access | Times Cited: 9
Analysis of metagenomic data
Shaopeng Liu, Judith Rodríguez, Viorel Munteanu, et al.
Nature Reviews Methods Primers (2025) Vol. 5, Iss. 1
Closed Access | Times Cited: 1
Genetic and species rearrangements in microbial consortia impact biodegradation potential
Zaki Saati‐Santamaría, Pilar Navarro‐Gómez, Juan A Martínez-Mancebo, et al.
The ISME Journal (2025)
Closed Access | Times Cited: 1
Culture‐Independent Species‐Level Taxonomic and Functional Characterisation of Bacteroides, the Core Bacterial Genus Within Reptile Guts
Carmen Hoffbeck, Danielle Middleton, Jessica A. Wallbank, et al.
Molecular Ecology (2025)
Open Access | Times Cited: 1
Multi-Omics Reveal Microbial Succession and Metabolomic Adaptations to Flood in a Hypersaline Coastal Lagoon
Christopher Keneally, Daniel Chilton, Tyler Dornan, et al.
Water Research (2025), pp. 123511-123511
Open Access | Times Cited: 1
Greengenes2 enables a shared data universe for microbiome studies
Daniel McDonald, Yueyu Jiang, Metin Balaban, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 30
Metabolic and Microbial Profiling of Soil Microbial Community under Per- and Polyfluoroalkyl Substance (PFAS) Stress
Enhui Wu, Kun Wang, Zhengzheng Liu, et al.
Environmental Science & Technology (2023) Vol. 57, Iss. 51, pp. 21855-21865
Closed Access | Times Cited: 18
Co-occurrence network analysis reveals the alterations of the skin microbiome and metabolome in adults with mild to moderate atopic dermatitis
Paulo Wender Portal Gomes, Helena Mannochio-Russo, Junhong Mao, et al.
mSystems (2024) Vol. 9, Iss. 3
Open Access | Times Cited: 8
Spread of antibiotic resistance genes in drinking water reservoirs: Insights from a deep metagenomic study using a curated database
Sai Wang, Wenhan Nie, Qing Gu, et al.
Water Research (2024) Vol. 256, pp. 121572-121572
Open Access | Times Cited: 8
Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
Abzer Kelminal Pakkir Mohamed Shah, Axel Walter, Filip Ottosson, et al.
Nature Protocols (2024)
Closed Access | Times Cited: 8
A vast repertoire of secondary metabolites potentially influences community dynamics and biogeochemical processes in cold seeps
Xiyang Dong, Tianxueyu Zhang, Weichao Wu, et al.
Science Advances (2024) Vol. 10, Iss. 17
Open Access | Times Cited: 7
Soil microbiome interventions for carbon sequestration and climate mitigation
Gwyn A. Beattie, Anna Edlund, Nwadiuto Esiobu, et al.
mSystems (2024)
Open Access | Times Cited: 6
16S rRNA gene‐based meta‐analysis of the reptile gut microbiota reveals environmental effects, host influences and a limited core microbiota
Carmen Hoffbeck, Danielle M. R. L. Middleton, Nicola J. Nelson, et al.
Molecular Ecology (2023) Vol. 32, Iss. 22, pp. 6044-6058
Open Access | Times Cited: 16
Biogeographic patterns of biosynthetic potential and specialized metabolites in marine sediments
Alexander B. Chase, Alexander Bogdanov, Alyssa M. Demko, et al.
The ISME Journal (2023) Vol. 17, Iss. 7, pp. 976-983
Open Access | Times Cited: 14
Integrated microbiome and metabolome analyses reveal the effects of low pH on intestinal health and homeostasis of crayfish (Procambarus clarkii)
Zhanqi Wang, Jiapeng Li, Pengfei Zhao, et al.
Aquatic Toxicology (2024) Vol. 270, pp. 106903-106903
Closed Access | Times Cited: 5
Inter-kingdom interactions and stability of methanogens revealed by machine-learning guided multi-omics analysis of industrial-scale biogas plants
Roland Wirth, Zoltán Bagi, Prateek Shetty, et al.
The ISME Journal (2023) Vol. 17, Iss. 8, pp. 1326-1339
Open Access | Times Cited: 12
Critical review on in silico methods for structural annotation of chemicals detected with LC/HRMS non-targeted screening
Henrik Hupatz, Ida Rahu, Wei‐Chieh Wang, et al.
Analytical and Bioanalytical Chemistry (2024)
Open Access | Times Cited: 4
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