OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Identification of non-coding silencer elements and their regulation of gene expression
Baoxu Pang, Jan Hendrik van Weerd, Feija L. Hamoen, et al.
Nature Reviews Molecular Cell Biology (2022) Vol. 24, Iss. 6, pp. 383-395
Open Access | Times Cited: 61

Showing 1-25 of 61 citing articles:

Transcription regulation by long non-coding RNAs: mechanisms and disease relevance
Jorge Ferrer, Nadya Dimitrova
Nature Reviews Molecular Cell Biology (2024) Vol. 25, Iss. 5, pp. 396-415
Open Access | Times Cited: 85

Transcription factor interactions explain the context-dependent activity of CRX binding sites
Kaiser Loell, Ryan Z. Friedman, Connie A. Myers, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 1, pp. e1011802-e1011802
Open Access | Times Cited: 13

Uncovering the whole genome silencers of human cells via Ss-STARR-seq
Xiusheng Zhu, Lei Huang, Chao Wang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1

An oligodendrocyte silencer element underlies the pathogenic impact of lamin B1 structural variants
Bruce Nmezi, Guillermo Rodríguez Bey, Talia DeFrancesco Oranburg, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1

KSHV genome harbors both constitutive and lytically induced enhancers
Nilabja Roy Chowdhury, Vyacheslav Gurevich, Meir Shamay
Journal of Virology (2024) Vol. 98, Iss. 6
Open Access | Times Cited: 7

A screen for regeneration-associated silencer regulatory elements in zebrafish
Kazunori Ando, Jianhong Ou, John Thompson, et al.
Developmental Cell (2024) Vol. 59, Iss. 5, pp. 676-691.e5
Closed Access | Times Cited: 4

Genome-wide Cas9-mediated screening of essential non-coding regulatory elements via libraries of paired single-guide RNAs
Yufeng Li, M. Tan, Almira Akkari-Henić, et al.
Nature Biomedical Engineering (2024) Vol. 8, Iss. 7, pp. 890-908
Open Access | Times Cited: 4

Super-enhancers in hepatocellular carcinoma: regulatory mechanism and therapeutic targets
Xuejin Lu, Meizi Zhu, Xueliang Pei, et al.
Cancer Cell International (2025) Vol. 25, Iss. 1
Open Access

New insights into the cis-regulation of the CFTR gene in pancreatic cells
Clara Blotas, Anaïs Le Nabec, Mégane Collobert, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access

Defining the regulatory logic of breast cancer using single-cell epigenetic and transcriptome profiling
Matthew J. Regner, Susana García‐Recio, Aatish Thennavan, et al.
Cell Genomics (2025), pp. 100765-100765
Open Access

Genome-wide identification and characterization of QTLs for transcriptional noise in human midbrain cells
Naoki Hirose, Shota Mizuno, Y. Niwa, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access

Developing a genome-wide long sequence-specific tag for sex identification in spotted knifejaw (Oplegnathus punctatus)
Pingrui Xu, Yongshuang Xiao, Zhizhong Xiao, et al.
Molecular Genetics and Genomics (2025) Vol. 300, Iss. 1
Closed Access

Cis-Regulation of the CFTR Gene in Pancreatic Cells
Clara Blotas, Anaïs Le Nabec, Mégane Collobert, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 8, pp. 3788-3788
Open Access

DeepICSH: a complex deep learning framework for identifying cell-specific silencers and their strength from the human genome
Tianjiao Zhang, Liangyu Li, Hailong Sun, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Closed Access | Times Cited: 9

Discovering the hidden function in fungal genomes
Nicholas C. Gervais, Rebecca S. Shapiro
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 2

KSHV genome harbors both constitutive and lytically induced enhancers
Nilabja Roy Chowdhury, Vyacheslav Gurevich, Meir Shamay
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2

Evolution of a Human-Specific De Novo Open Reading Frame and Its Linked Transcriptional Silencer
Nicholas Delihas
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 7, pp. 3924-3924
Open Access | Times Cited: 2

Cut from the same cloth: RNAs transcribed from regulatory elements
Ekaterina M. Stasevich, Anna Šimonová, Е. А. Богомолова, et al.
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms (2024) Vol. 1867, Iss. 3, pp. 195049-195049
Closed Access | Times Cited: 2

SilenceREIN: seeking silencers on anchors of chromatin loops by deep graph neural networks
Jian-Hua Pan, Pu-Feng Du
Briefings in Bioinformatics (2023) Vol. 25, Iss. 1
Open Access | Times Cited: 5

TSCRE: a comprehensive database for tumor-specific cis-regulatory elements
Guanjie Peng, Bingyuan Liu, Mohan Zheng, et al.
NAR Cancer (2024) Vol. 6, Iss. 1
Open Access | Times Cited: 1

Accelerated evolution in the human lineage led to gain and loss of transcriptional enhancers in the RBFOX1 locus
Lara Berasain, Paula Beati, Anabella P. Trigila, et al.
Science Advances (2024) Vol. 10, Iss. 26
Open Access | Times Cited: 1

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