OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth
Yan Shao, Samuel C. Forster, Evdokia Tsaliki, et al.
Nature (2019) Vol. 574, Iss. 7776, pp. 117-121
Open Access | Times Cited: 818

Showing 1-25 of 818 citing articles:

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3
Francesco Beghini, Lauren J. McIver, Aitor Blanco‐Míguez, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 1417

A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex
Margaret M. C. Lam, Ryan R. Wick, Stephen C. Watts, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 656

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4
Aitor Blanco‐Míguez, Francesco Beghini, Fabio Cumbo, et al.
Nature Biotechnology (2023) Vol. 41, Iss. 11, pp. 1633-1644
Open Access | Times Cited: 568

MGnify: the microbiome analysis resource in 2020
Alex Mitchell, Alexandre Almeida, Martín Beracochea, et al.
Nucleic Acids Research (2019)
Open Access | Times Cited: 515

inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains
Matthew R. Olm, Alexander Crits‐Christoph, Keith Bouma‐Gregson, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 6, pp. 727-736
Open Access | Times Cited: 374

The Female Vaginal Microbiome in Health and Bacterial Vaginosis
Xiaodi Chen, Yune Lu, Tao Chen, et al.
Frontiers in Cellular and Infection Microbiology (2021) Vol. 11
Open Access | Times Cited: 307

Maternal Fecal Microbiota Transplantation in Cesarean-Born Infants Rapidly Restores Normal Gut Microbial Development: A Proof-of-Concept Study
Katri Korpela, Otto Helve, Kaija-Leena Kolho, et al.
Cell (2020) Vol. 183, Iss. 2, pp. 324-334.e5
Open Access | Times Cited: 287

Multi-kingdom ecological drivers of microbiota assembly in preterm infants
Chitong Rao, Katharine Z. Coyte, Wayne Bainter, et al.
Nature (2021) Vol. 591, Iss. 7851, pp. 633-638
Open Access | Times Cited: 269

The person-to-person transmission landscape of the gut and oral microbiomes
Mireia Valles‐Colomer, Aitor Blanco‐Míguez, Paolo Manghi, et al.
Nature (2023) Vol. 614, Iss. 7946, pp. 125-135
Open Access | Times Cited: 258

The Microbiota–Gut–Brain Axis in Psychiatric Disorders
Aleksandra Góralczyk-Bińkowska, Dagmara Szmajda‐Krygier, Elżbieta Kozłowska
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 19, pp. 11245-11245
Open Access | Times Cited: 239

Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies
Katherine M. Kennedy, Marcus C. de Goffau, María Elisa Pérez-Muñoz, et al.
Nature (2023) Vol. 613, Iss. 7945, pp. 639-649
Open Access | Times Cited: 235

Precision medicine in the era of artificial intelligence: implications in chronic disease management
Murugan Subramanian, Anne Wojtusciszyn, Lucie Favre, et al.
Journal of Translational Medicine (2020) Vol. 18, Iss. 1
Open Access | Times Cited: 228

Breastmilk Feeding Practices Are Associated with the Co-Occurrence of Bacteria in Mothers’ Milk and the Infant Gut: the CHILD Cohort Study
Kelsey Fehr, Shirin Moossavi, Hind Sbihi, et al.
Cell Host & Microbe (2020) Vol. 28, Iss. 2, pp. 285-297.e4
Open Access | Times Cited: 226

Key bacterial taxa and metabolic pathways affecting gut short-chain fatty acid profiles in early life
Naoki Tsukuda, K. Tanigawa, T. Hara, et al.
The ISME Journal (2021) Vol. 15, Iss. 9, pp. 2574-2590
Open Access | Times Cited: 219

Control of Immunity by the Microbiota
Eduard Ansaldo, Taylor K. Farley, Yasmine Belkaid
Annual Review of Immunology (2021) Vol. 39, Iss. 1, pp. 449-479
Closed Access | Times Cited: 215

Microbiota Supplementation with Bifidobacterium and Lactobacillus Modifies the Preterm Infant Gut Microbiota and Metabolome: An Observational Study
Cristina Alcon‐Giner, Matthew J. Dalby, Shabhonam Caim, et al.
Cell Reports Medicine (2020) Vol. 1, Iss. 5, pp. 100077-100077
Open Access | Times Cited: 181

Delivery Mode Affects Stability of Early Infant Gut Microbiota
Caroline M. Mitchell, Chiara Mazzoni, Larson Hogstrom, et al.
Cell Reports Medicine (2020) Vol. 1, Iss. 9, pp. 100156-100156
Open Access | Times Cited: 173

Microbiota-mediated colonization resistance: mechanisms and regulation
Gustavo Caballero-Flores, Joseph M. Pickard, Gabriel Núñez
Nature Reviews Microbiology (2022) Vol. 21, Iss. 6, pp. 347-360
Open Access | Times Cited: 172

Stochasticity constrained by deterministic effects of diet and age drive rumen microbiome assembly dynamics
Ori Furman, Liat Shenhav, Goor Sasson, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 165

Childhood Development and the Microbiome—The Intestinal Microbiota in Maintenance of Health and Development of Disease During Childhood Development
Victoria Ronan, Rummanu Yeasin, Erika C. Claud
Gastroenterology (2020) Vol. 160, Iss. 2, pp. 495-506
Open Access | Times Cited: 158

Microbiota succession throughout life from the cradle to the grave
Cameron Martino, Amanda Hazel Dilmore, Zachary M. Burcham, et al.
Nature Reviews Microbiology (2022) Vol. 20, Iss. 12, pp. 707-720
Closed Access | Times Cited: 158

Neuropathobiology of COVID-19: The Role for Glia
Marie‐Ève Tremblay, Charlotte Madore, Maude Bordeleau, et al.
Frontiers in Cellular Neuroscience (2020) Vol. 14
Open Access | Times Cited: 150

Viral Infections, the Microbiome, and Probiotics
Ashton Harper, Vineetha Vijayakumar, Arthur C. Ouwehand, et al.
Frontiers in Cellular and Infection Microbiology (2021) Vol. 10
Open Access | Times Cited: 145

Maternal Microbiota, Early Life Colonization and Breast Milk Drive Immune Development in the Newborn
Cristina Kalbermatter, Nerea Fernandez Trigo, Sandro Christensen, et al.
Frontiers in Immunology (2021) Vol. 12
Open Access | Times Cited: 129

Priming for Life: Early Life Nutrition and the Microbiota-Gut-Brain Axis
Anna Ratsika, Martin G. Codagnone, Siobhain M. O’Mahony, et al.
Nutrients (2021) Vol. 13, Iss. 2, pp. 423-423
Open Access | Times Cited: 128

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