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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells
Eleni P. Mimitou, Caleb A. Lareau, Kelvin Y. Chen, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 10, pp. 1246-1258
Open Access | Times Cited: 367

Showing 1-25 of 367 citing articles:

Integrated analysis of multimodal single-cell data
Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen, et al.
Cell (2021) Vol. 184, Iss. 13, pp. 3573-3587.e29
Open Access | Times Cited: 10335
Single-cell chromatin state analysis with Signac
Tim Stuart, Avi Srivastava, Shaista Madad, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1333-1341
Open Access | Times Cited: 1087
Methods and applications for single-cell and spatial multi-omics
Katy Vandereyken, Alejandro Sifrim, Bernard Thienpont, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 494-515
Open Access | Times Cited: 606
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 513
The technological landscape and applications of single-cell multi-omics
Alev Baysoy, Zhiliang Bai, Rahul Satija, et al.
Nature Reviews Molecular Cell Biology (2023) Vol. 24, Iss. 10, pp. 695-713
Open Access | Times Cited: 446
Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function
Gökçen Eraslan, Eugene Drokhlyansky, Shankara Anand, et al.
Science (2022) Vol. 376, Iss. 6594
Open Access | Times Cited: 280
Dissection of artifactual and confounding glial signatures by single-cell sequencing of mouse and human brain
Samuel E. Marsh, Alec J. Walker, Tushar Kamath, et al.
Nature Neuroscience (2022) Vol. 25, Iss. 3, pp. 306-316
Open Access | Times Cited: 268
scGPT: toward building a foundation model for single-cell multi-omics using generative AI
Haotian Cui, Xiaoming Wang, Hassaan Maan, et al.
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1470-1480
Open Access | Times Cited: 262
Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution
Dian Yang, Matthew G. Jones, Santiago Naranjo, et al.
Cell (2022) Vol. 185, Iss. 11, pp. 1905-1923.e25
Open Access | Times Cited: 221
Applications of single-cell RNA sequencing in drug discovery and development
Bram Van de Sande, Joon Sang Lee, Euphemia Mutasa-Gottgens, et al.
Nature Reviews Drug Discovery (2023) Vol. 22, Iss. 6, pp. 496-520
Open Access | Times Cited: 202
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
Elliott Swanson, Cara Lord, Julian Reading, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 197
Epigenetic regulation of T cell exhaustion
Julia A. Belk, Bence Dániel, Ansuman T. Satpathy
Nature Immunology (2022) Vol. 23, Iss. 6, pp. 848-860
Open Access | Times Cited: 178
Single-cell proteomics enabled by next-generation sequencing or mass spectrometry
Hayley M. Bennett, William Stephenson, Christopher M. Rose, et al.
Nature Methods (2023) Vol. 20, Iss. 3, pp. 363-374
Closed Access | Times Cited: 178
Characterizing cis-regulatory elements using single-cell epigenomics
Sebastian Preißl, Kyle J. Gaulton, Bing Ren
Nature Reviews Genetics (2022) Vol. 24, Iss. 1, pp. 21-43
Closed Access | Times Cited: 149
Impact of the Human Cell Atlas on medicine
Jennifer Rood, Aidan Maartens, Anna Hupalowska, et al.
Nature Medicine (2022) Vol. 28, Iss. 12, pp. 2486-2496
Open Access | Times Cited: 145
Normalizing and denoising protein expression data from droplet-based single cell profiling
Matthew P. Mulè, Andrew J. Martins, John S. Tsang
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 129
MultiVI: deep generative model for the integration of multimodal data
Tal Ashuach, Mariano I. Gabitto, Rohan V. Koodli, et al.
Nature Methods (2023) Vol. 20, Iss. 8, pp. 1222-1231
Open Access | Times Cited: 127
scGPT: Towards Building a Foundation Model for Single-Cell Multi-omics Using Generative AI
Haotian Cui, Xiaoming Wang, Hassaan Maan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 116
scJoint integrates atlas-scale single-cell RNA-seq and ATAC-seq data with transfer learning
Yingxin Lin, Tung-Yu Wu, Sheng Wan, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 5, pp. 703-710
Open Access | Times Cited: 110
BABEL enables cross-modality translation between multiomic profiles at single-cell resolution
Kevin Wu, Kathryn E. Yost, Howard Y. Chang, et al.
Proceedings of the National Academy of Sciences (2021) Vol. 118, Iss. 15
Open Access | Times Cited: 105
Clonal expansion and epigenetic inheritance of long-lasting NK cell memory
Timo Rückert, Caleb A. Lareau, Mir‐Farzin Mashreghi, et al.
Nature Immunology (2022) Vol. 23, Iss. 11, pp. 1551-1563
Open Access | Times Cited: 105
Integration of whole transcriptome spatial profiling with protein markers
Nir Ben-Chetrit, Xiang Niu, Ariel D. Swett, et al.
Nature Biotechnology (2023) Vol. 41, Iss. 6, pp. 788-793
Open Access | Times Cited: 101
NEAT-seq: simultaneous profiling of intra-nuclear proteins, chromatin accessibility and gene expression in single cells
Amy F. Chen, Benjamin Parks, Arwa S. Kathiria, et al.
Nature Methods (2022) Vol. 19, Iss. 5, pp. 547-553
Open Access | Times Cited: 97
Gene function and cell surface protein association analysis based on single-cell multiomics data
Huan Hu, Zhen Feng, Hai Lin, et al.
Computers in Biology and Medicine (2023) Vol. 157, pp. 106733-106733
Closed Access | Times Cited: 91
Mitochondrial variant enrichment from high-throughput single-cell RNA sequencing resolves clonal populations
Tyler E. Miller, Caleb A. Lareau, Julia A. Verga, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 7, pp. 1030-1034
Open Access | Times Cited: 88
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