Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
Derek M. Bickhart, Mikhail Kolmogorov, Elizabeth Tseng, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 5, pp. 711-719
Closed Access | Times Cited: 165

Showing 1-25 of 165 citing articles:

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing
Mantas Sereika, Rasmus Hansen Kirkegaard, Søren Michael Karst, et al.
Nature Methods (2022) Vol. 19, Iss. 7, pp. 823-826
Open Access | Times Cited: 332
Expansion of the global RNA virome reveals diverse clades of bacteriophages
Uri Neri, Yuri I. Wolf, Simon Roux, et al.
Cell (2022) Vol. 185, Iss. 21, pp. 4023-4037.e18
Open Access | Times Cited: 205
Metagenomics-enabled microbial surveillance
Karrie Kwan Ki Ko, Kern Rei Chng, Niranjan Nagarajan
Nature Microbiology (2022) Vol. 7, Iss. 4, pp. 486-496
Open Access | Times Cited: 166
Metagenome assembly of high-fidelity long reads with hifiasm-meta
Xiaowen Feng, Haoyu Cheng, Daniel M. Portik, et al.
Nature Methods (2022) Vol. 19, Iss. 6, pp. 671-674
Open Access | Times Cited: 124
Genomics in the long-read sequencing era
Erwin L. van Dijk, Delphine Naquin, Kévin Gorrichon, et al.
Trends in Genetics (2023) Vol. 39, Iss. 9, pp. 649-671
Closed Access | Times Cited: 73
RefSeq and the prokaryotic genome annotation pipeline in the age of metagenomes
Daniel H. Haft, Azat Badretdin, George Coulouris, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D762-D769
Open Access | Times Cited: 59
SemiBin2: self-supervised contrastive learning leads to better MAGs for short- and long-read sequencing
Shaojun Pan, Xing‐Ming Zhao, Luís Pedro Coelho
Bioinformatics (2023) Vol. 39, Iss. Supplement_1, pp. i21-i29
Open Access | Times Cited: 49
Capturing the microbial dark matter in desert soils using culturomics-based metagenomics and high-resolution analysis
Shuai Li, Wen‐Hui Lian, Jia-Rui Han, et al.
npj Biofilms and Microbiomes (2023) Vol. 9, Iss. 1
Open Access | Times Cited: 48
Improving cassava bacterial blight resistance by editing the epigenome
Kira M. Veley, Kiona Elliott, Greg Jensen, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 47
A high-quality genome compendium of the human gut microbiome of Inner Mongolians
Hao Jin, Keyu Quan, Qiuwen He, et al.
Nature Microbiology (2023) Vol. 8, Iss. 1, pp. 150-161
Closed Access | Times Cited: 47
High-quality metagenome assembly from long accurate reads with metaMDBG
Gaëtan Benoit, Sébastien Raguideau, Robert James, et al.
Nature Biotechnology (2024) Vol. 42, Iss. 9, pp. 1378-1383
Open Access | Times Cited: 37
Unveiling microbial diversity: harnessing long-read sequencing technology
Daniel Paiva Agustinho, Yilei Fu, Vipin K. Menon, et al.
Nature Methods (2024) Vol. 21, Iss. 6, pp. 954-966
Closed Access | Times Cited: 29
Soil metabolomics - current challenges and future perspectives
Robert W. Brown, Michaela Reay, Florian Centler, et al.
Soil Biology and Biochemistry (2024) Vol. 193, pp. 109382-109382
Open Access | Times Cited: 21
Contribution of the patient microbiome to surgical site infection and antibiotic prophylaxis failure in spine surgery
Dustin R. Long, Chloe Bryson‐Cahn, Adam Waalkes, et al.
Science Translational Medicine (2024) Vol. 16, Iss. 742
Closed Access | Times Cited: 21
Nanopore long-read-only metagenomics enables complete and high-quality genome reconstruction from mock and complex metagenomes
Lei Liu, Yang Yu, Yu Deng, et al.
Microbiome (2022) Vol. 10, Iss. 1
Open Access | Times Cited: 62
Considerations for constructing a protein sequence database for metaproteomics
J. Alfredo Blakeley‐Ruiz, Manuel Kleiner
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 937-952
Open Access | Times Cited: 55
HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota
Chan Yeong Kim, Junyeong Ma, Insuk Lee
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 53
New insight and enhancement mechanisms for Feammox process by electron shuttles in wastewater treatment — A systematic review
Shanshan Sun, Manping Zhang, Xushun Gu, et al.
Bioresource Technology (2022) Vol. 369, pp. 128495-128495
Closed Access | Times Cited: 52
Genome-centric analysis of short and long read metagenomes reveals uncharacterized microbiome diversity in Southeast Asians
Jean-Sébastien Gounot, Minghao Chia, Denis Bertrand, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 45
Identification of errors in draft genome assemblies at single-nucleotide resolution for quality assessment and improvement
Kunpeng Li, Peng Xu, Jinpeng Wang, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 30
Closed genomes uncover a saltwater species of Candidatus Electronema and shed new light on the boundary between marine and freshwater cable bacteria
Mantas Sereika, Francesca Petriglieri, Thomas Bygh Nymann Jensen, et al.
The ISME Journal (2023) Vol. 17, Iss. 4, pp. 561-569
Open Access | Times Cited: 25
Benchmarking genome assembly methods on metagenomic sequencing data
Zhenmiao Zhang, Chao Yang, Werner Pieter Veldsman, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 2
Closed Access | Times Cited: 23
BASALT refines binning from metagenomic data and increases resolution of genome-resolved metagenomic analysis
Zhiguang Qiu, Li Yuan, Chun-Ang Lian, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 15
Exploring Cereal Metagenomics: Unravelling Microbial Communities for Improved Food Security
Kedibone Masenya, Madira Coutlyne Manganyi, Tshegofatso Bridget Dikobe
Microorganisms (2024) Vol. 12, Iss. 3, pp. 510-510
Open Access | Times Cited: 13
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans
Funing Tian, James M. Wainaina, Cristina Howard‐Varona, et al.
Microbiome (2024) Vol. 12, Iss. 1
Open Access | Times Cited: 13
Page 1 - Next Page

Scroll to top