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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Integration of spatial and single-cell data across modalities with weakly linked features
Shuxiao Chen, Bokai Zhu, Sijia Huang, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 7, pp. 1096-1106
Open Access | Times Cited: 41

Showing 1-25 of 41 citing articles:

Multiplex protein imaging in tumour biology
Natalie de Souza, Shan Zhao, Bernd Bodenmiller
Nature reviews. Cancer (2024) Vol. 24, Iss. 3, pp. 171-191
Closed Access | Times Cited: 30
AI-driven multi-omics integration for multi-scale predictive modeling of genotype-environment-phenotype relationships
You Wu, Lei Xie
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 265-277
Open Access | Times Cited: 4
Lost in space: what single-cell RNA sequencing cannot tell you
Kelvin Adema, Michael A. Schon, Michael D. Nodine, et al.
Trends in Plant Science (2024) Vol. 29, Iss. 9, pp. 1018-1028
Open Access | Times Cited: 11
Multimodal bioimaging across disciplines and scales: challenges, opportunities and breaking down barriers
Johanna Bischof, Georgina Fletcher, Paul Verkade, et al.
npj Imaging (2024) Vol. 2, Iss. 1
Open Access | Times Cited: 10
Single-cell spatial multiomics reveals tumor microenvironment vulnerabilities in cancer resistance to immunotherapy
Camelia Quek, Aditya Pratapa, Xinyu Bai, et al.
Cell Reports (2024) Vol. 43, Iss. 7, pp. 114392-114392
Open Access | Times Cited: 10
Single-cell technology grows up: Leveraging high-resolution omics approaches to understand neurodevelopmental disorders
Joseph D. Dougherty, Simona Sarafinovska, Sneha Chaturvedi, et al.
Current Opinion in Neurobiology (2025) Vol. 92, pp. 102990-102990
Open Access | Times Cited: 1
Advancements and applications of single-cell multi-omics techniques in cancer research: Unveiling heterogeneity and paving the way for precision therapeutics
Anqi Liang, Ying Kong, Zhi Hong Chen, et al.
Biochemistry and Biophysics Reports (2023) Vol. 37, pp. 101589-101589
Open Access | Times Cited: 20
Structural variation in the pangenome of wild and domesticated barley
Murukarthick Jayakodi, Qiongxian Lu, Hélène Pidon, et al.
Nature (2024) Vol. 636, Iss. 8043, pp. 654-662
Open Access | Times Cited: 8
Spatial oncology: Translating contextual biology to the clinic
Dennis Gong, Jeanna M Arbesfeld-Qiu, Ella Perrault, et al.
Cancer Cell (2024)
Closed Access | Times Cited: 6
Spatial omics advances for in situ RNA biology
Jingyi Ren, Shuchen Luo, Hailing Shi, et al.
Molecular Cell (2024)
Closed Access | Times Cited: 4
High-resolution digital dissociation of brain tumors with deep multimodal autoencoder
Jiao Sun, Yue Pan, Tong Lin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Single-cell genomics and spatial transcriptomics in islet transplantation for diabetes treatment: advancing towards personalized therapies
Lisha Mou, Tony Bowei Wang, Yuxian Chen, et al.
Frontiers in Immunology (2025) Vol. 16
Open Access
Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis
Joana Campos, Jack L. McMurray, Michelangelo Certo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Quantitative characterization of cell niches in spatially resolved omics data
Sebastian Birk, Irene Bonafonte-Pardàs, Adib Miraki Feriz, et al.
Nature Genetics (2025)
Open Access
Integrative single-cell metabolomics and phenotypic profiling reveals metabolic heterogeneity of cellular oxidation and senescence
Ziyi Wang, Si-Yuan Ge, Tiepeng Liao, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Neoadjuvant immune checkpoint therapy: Enabling insights into fundamental human immunology and clinical benefit
Kristen E. Pauken, Omar Alhalabi, Sangeeta Goswami, et al.
Cancer Cell (2025)
Closed Access
Spatial mapping of immune cell environments in NF2-related schwannomatosis vestibular schwannoma
Adam P. Jones, Michael Haley, Miriam Hernandez-Meadows, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Quantitative characterization of tissue states using multiomics and ecological spatial analysis
Daisy Yi Ding, Zeyu Tang, Bokai Zhu, et al.
Nature Genetics (2025)
Open Access
Partially characterized topology guides reliable anchor-free scRNA-integration
Chuan He, Paraskevas Filippidis, Steven H. Kleinstein, et al.
Communications Biology (2025) Vol. 8, Iss. 1
Open Access
Spatially resolved tissue imaging to analyze the tumor immune microenvironment: beyond cell-type densities.
Álvaro López‐Janeiro, Eduardo Miraval Wong, Daniel Jiménez‐Sánchez, et al.
PubMed (2024) Vol. 12, Iss. 5
Closed Access | Times Cited: 3
scCorrector: a robust method for integrating multi-study single-cell data
Zhen-Hao Guo, Yanbin Wang, Siguo Wang, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 2
scProAtlas: an atlas of multiplexed single-cell spatial proteomics imaging in human tissues
Tiangang Wang, Xuanmin Chen, Yujuan Han, et al.
Nucleic Acids Research (2024) Vol. 53, Iss. D1, pp. D582-D594
Open Access | Times Cited: 2
COEXIST: Coordinated single-cell integration of serial multiplexed tissue images
Robert T. Heussner, Cameron Watson, Christopher Eddy, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Proximogram—A multi-omics network-based framework to capture tissue heterogeneity integrating single-cell omics and spatial profiling
Santhoshi Krishnan, Sunjong Ji, Ahmed M. Elhossiny, et al.
Computers in Biology and Medicine (2024) Vol. 182, pp. 109082-109082
Open Access | Times Cited: 1
Spatially resolved single-cell atlas unveils a distinct cellular signature of fatal lung COVID-19 in a Malawian population
James Nyirenda, Olympia Hardy, João Luiz Silva‐Filho, et al.
Nature Medicine (2024) Vol. 30, Iss. 12, pp. 3765-3777
Open Access | Times Cited: 1
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