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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Transcript-indexed ATAC-seq for precision immune profiling
Ansuman T. Satpathy, Naresha Saligrama, Jason D. Buenrostro, et al.
Nature Medicine (2018) Vol. 24, Iss. 5, pp. 580-590
Open Access | Times Cited: 134

Showing 1-25 of 134 citing articles:

Chromatin accessibility and the regulatory epigenome
Sandy Klemm, Zohar Shipony, William J. Greenleaf
Nature Reviews Genetics (2019) Vol. 20, Iss. 4, pp. 207-220
Closed Access | Times Cited: 1464
ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis
Jeffrey M. Granja, M. Ryan Corces, Sarah E. Pierce, et al.
Nature Genetics (2021) Vol. 53, Iss. 3, pp. 403-411
Open Access | Times Cited: 970
Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion
Ansuman T. Satpathy, Jeffrey M. Granja, Kathryn E. Yost, et al.
Nature Biotechnology (2019) Vol. 37, Iss. 8, pp. 925-936
Open Access | Times Cited: 804
The technological landscape and applications of single-cell multi-omics
Alev Baysoy, Zhiliang Bai, Rahul Satija, et al.
Nature Reviews Molecular Cell Biology (2023) Vol. 24, Iss. 10, pp. 695-713
Open Access | Times Cited: 446
Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia
Jeffrey M. Granja, Sandy Klemm, Lisa McGinnis, et al.
Nature Biotechnology (2019) Vol. 37, Iss. 12, pp. 1458-1465
Open Access | Times Cited: 428
Applications of single-cell sequencing in cancer research: progress and perspectives
Yalan Lei, Rong Tang, Jin Xu, et al.
Journal of Hematology & Oncology (2021) Vol. 14, Iss. 1
Open Access | Times Cited: 356
Single-cell multimodal omics: the power of many
Chenxu Zhu, Sebastian Preißl, Bing Ren
Nature Methods (2020) Vol. 17, Iss. 1, pp. 11-14
Closed Access | Times Cited: 351
Coupled Single-Cell CRISPR Screening and Epigenomic Profiling Reveals Causal Gene Regulatory Networks
Adam J. Rubin, Kevin R. Parker, Ansuman T. Satpathy, et al.
Cell (2018) Vol. 176, Iss. 1-2, pp. 361-376.e17
Open Access | Times Cited: 262
The epigenetic basis of cellular heterogeneity
Benjamin C. Carter, Keji Zhao
Nature Reviews Genetics (2020) Vol. 22, Iss. 4, pp. 235-250
Open Access | Times Cited: 238
Single-cell RNA sequencing in cardiovascular development, disease and medicine
David T. Paik, Sang-Kyun Cho, Lei Tian, et al.
Nature Reviews Cardiology (2020) Vol. 17, Iss. 8, pp. 457-473
Open Access | Times Cited: 237
Single-cell sequencing techniques from individual to multiomics analyses
Yukie Kashima, Yoshitaka Sakamoto, Keiya Kaneko, et al.
Experimental & Molecular Medicine (2020) Vol. 52, Iss. 9, pp. 1419-1427
Open Access | Times Cited: 205
High-throughput and single-cell T cell receptor sequencing technologies
Joy A. Pai, Ansuman T. Satpathy
Nature Methods (2021) Vol. 18, Iss. 8, pp. 881-892
Open Access | Times Cited: 204
Understanding tumor ecosystems by single-cell sequencing: promises and limitations
Xianwen Ren, Boxi Kang, Zemin Zhang
Genome biology (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 196
New paradigms on hematopoietic stem cell differentiation
Hui Cheng, Zhaofeng Zheng, Tao Cheng
Protein & Cell (2019) Vol. 11, Iss. 1, pp. 34-44
Open Access | Times Cited: 189
Computational methods for single-cell omics across modalities
Mirjana Efremova, Sarah A. Teichmann
Nature Methods (2020) Vol. 17, Iss. 1, pp. 14-17
Closed Access | Times Cited: 185
Single-cell chromatin immunocleavage sequencing (scChIC-seq) to profile histone modification
Wai Lim Ku, Kôsuke Nakamura, Weiwu Gao, et al.
Nature Methods (2019) Vol. 16, Iss. 4, pp. 323-325
Open Access | Times Cited: 165
Chromatin accessibility profiling methods
Liesbeth Minnoye, Georgi K. Marinov, Thomas Krausgruber, et al.
Nature Reviews Methods Primers (2021) Vol. 1, Iss. 1
Open Access | Times Cited: 135
Single cell cancer epigenetics
Marta Casado-Peláez, Alberto Bueno-Costa, Manel Esteller
Trends in cancer (2022) Vol. 8, Iss. 10, pp. 820-838
Open Access | Times Cited: 77
Single-cell lineage tracing by endogenous mutations enriched in transposase accessible mitochondrial DNA
Jin Xu, Kevin A. Nuno, Ulrike Litzenburger, et al.
eLife (2019) Vol. 8
Open Access | Times Cited: 133
Single-cell ATAC sequencing analysis: From data preprocessing to hypothesis generation
Seungbyn Baek, Insuk Lee
Computational and Structural Biotechnology Journal (2020) Vol. 18, pp. 1429-1439
Open Access | Times Cited: 128
Single-Cell Profiling of Cutaneous T-Cell Lymphoma Reveals Underlying Heterogeneity Associated with Disease Progression
Nicholas Borcherding, Andrew P. Voigt, Vincent Liu, et al.
Clinical Cancer Research (2019) Vol. 25, Iss. 10, pp. 2996-3005
Open Access | Times Cited: 105
Single-cell epigenomic landscape of peripheral immune cells reveals establishment of trained immunity in individuals convalescing from COVID-19
Maojun You, Liang Chen, Dawei Zhang, et al.
Nature Cell Biology (2021) Vol. 23, Iss. 6, pp. 620-630
Open Access | Times Cited: 97
Epigenetics Analysis and Integrated Analysis of Multiomics Data, Including Epigenetic Data, Using Artificial Intelligence in the Era of Precision Medicine
Ryuji Hamamoto, Masaaki Komatsu, Ken Takasawa, et al.
Biomolecules (2019) Vol. 10, Iss. 1, pp. 62-62
Open Access | Times Cited: 91
Advanced model systems and tools for basic and translational human immunology
Lisa E. Wagar, Robert M. DiFazio, Mark M. Davis
Genome Medicine (2018) Vol. 10, Iss. 1
Open Access | Times Cited: 88
Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen
Zhijian Li, Christoph Kuppe, Susanne Ziegler, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 86
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