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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination
Thomas C. Terwilliger, Dorothée Liebschner, Tristan I. Croll, et al.
Nature Methods (2023) Vol. 21, Iss. 1, pp. 110-116
Open Access | Times Cited: 153

Showing 1-25 of 153 citing articles:

UCSF ChimeraX: Tools for structure building and analysis
Elaine C. Meng, Thomas D. Goddard, Eric F. Pettersen, et al.
Protein Science (2023) Vol. 32, Iss. 11
Open Access | Times Cited: 1357
Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment
Marc F. Lensink, Guillaume Brysbaert, Nessim Raouraoua, et al.
Proteins Structure Function and Bioinformatics (2023) Vol. 91, Iss. 12, pp. 1658-1683
Open Access | Times Cited: 45
The ethics of using artificial intelligence in scientific research: new guidance needed for a new tool
David B. Resnik, Mohammad Hosseini
AI and Ethics (2024)
Open Access | Times Cited: 31
AlphaFold predictions of fold-switched conformations are driven by structure memorization
Devlina Chakravarty, Joseph W. Schafer, Ethan A. Chen, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 31
Towards realizing nano-enabled precision delivery in plants
Gregory V. Lowry, Juan Pablo Giraldo, Nicole F. Steinmetz, et al.
Nature Nanotechnology (2024) Vol. 19, Iss. 9, pp. 1255-1269
Open Access | Times Cited: 29
The power and pitfalls of AlphaFold2 for structure prediction beyond rigid globular proteins
Vinayak Agarwal, Andrew C. McShan
Nature Chemical Biology (2024) Vol. 20, Iss. 8, pp. 950-959
Closed Access | Times Cited: 28
Structure is beauty, but not always truth
James S. Fraser, Mark A. Murcko
Cell (2024) Vol. 187, Iss. 3, pp. 517-520
Open Access | Times Cited: 21
Community recommendations on cryoEM data archiving and validation
Gerard J. Kleywegt, Paul D. Adams, Sarah J. Butcher, et al.
IUCrJ (2024) Vol. 11, Iss. 2, pp. 140-151
Open Access | Times Cited: 16
The Role of Artificial Intelligence and Machine Learning in Predicting and Combating Antimicrobial Resistance
Hazrat Bilal, Muhammad Nadeem Khan, Sabir Khan, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 423-439
Open Access | Times Cited: 5
Recent Progress of Protein Tertiary Structure Prediction
Qiqige Wuyun, Yihan Chen, Yifeng Shen, et al.
Molecules (2024) Vol. 29, Iss. 4, pp. 832-832
Open Access | Times Cited: 13
Overview of AlphaFold2 and breakthroughs in overcoming its limitations
Lei Wang, Zehua Wen, Shiwei Liu, et al.
Computers in Biology and Medicine (2024) Vol. 176, pp. 108620-108620
Closed Access | Times Cited: 13
RCSB Protein Data Bank: supporting research and education worldwide through explorations of experimentally determined and computationally predicted atomic level 3D biostructures
S.K. Burley, Dennis W. Piehl, Brinda Vallat, et al.
IUCrJ (2024) Vol. 11, Iss. 3, pp. 279-286
Open Access | Times Cited: 12
DomainFit: Identification of protein domains in cryo-EM maps at intermediate resolution using AlphaFold2-predicted models
Jerry Gao, Maxwell Tong, Chinkyu Lee, et al.
Structure (2024) Vol. 32, Iss. 8, pp. 1248-1259.e5
Open Access | Times Cited: 11
AlphaFold two years on: Validation and impact
Oleg Kovalevskiy, Juan Mateos-García, Kathryn Tunyasuvunakool
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 34
Open Access | Times Cited: 10
Acetyl-CoA synthetase activity is enzymatically regulated by lysine acetylation using acetyl-CoA or acetyl-phosphate as donor molecule
Chuan Qin, Leonie G. Graf, Kilian Striska, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 9
Directed Evolution of Protoglobin Optimizes the Enzyme Electric Field
Shobhit S. Chaturvedi, Santiago Vargas, Pujan Ajmera, et al.
Journal of the American Chemical Society (2024) Vol. 146, Iss. 24, pp. 16670-16680
Open Access | Times Cited: 8
Structural model of a bacterial focal adhesion complex
Christian Cambillau, Tâm Mignot
Communications Biology (2025) Vol. 8, Iss. 1
Open Access | Times Cited: 1
Severe deviation in protein fold prediction by advanced AI: a case study
Jacinto López‐Sagaseta, Alejandro Urdiciain
Scientific Reports (2025) Vol. 15, Iss. 1
Open Access | Times Cited: 1
Bias in, bias out – AlphaFold-Multimer and the structural complexity of protein interfaces
Joelle Strom, Katja Luck
Current Opinion in Structural Biology (2025) Vol. 91, pp. 103002-103002
Closed Access | Times Cited: 1
Dual functional POGases from bacteria encompassing broader O-glycanase and adhesin activities
Linjiao Zhou, Uriel Ortega‐Rodriguez, Matthew J. Flores, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1
Structural biology: A golden era
Oliviero Carugo, Kristina Djinović‐Carugo
PLoS Biology (2023) Vol. 21, Iss. 6, pp. e3002187-e3002187
Open Access | Times Cited: 19
AlphaFold found thousands of possible psychedelics. Will its predictions help drug discovery?
Ewen Callaway
Nature (2024) Vol. 626, Iss. 7997, pp. 14-15
Closed Access | Times Cited: 7
Predicting Functional Conformational Ensembles and Binding Mechanisms of Convergent Evolution for SARS-CoV-2 Spike Omicron Variants Using AlphaFold2 Sequence Scanning Adaptations and Molecular Dynamics Simulations
Nishank Raisinghani, Mohammed Alshahrani, Grace Gupta, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
Integration of a Randomized Sequence Scanning Approach in AlphaFold2 and Local Frustration Profiling of Conformational States Enable Interpretable Atomistic Characterization of Conformational Ensembles and Detection of Hidden Allosteric States in the ABL1 Protein Kinase
Nishank Raisinghani, Mohammed Alshahrani, Grace Gupta, et al.
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 12, pp. 5317-5336
Closed Access | Times Cited: 6
Reliability of AlphaFold2 Models in Virtual Drug Screening: A Focus on Selected Class A GPCRs
Nada K. Alhumaid, Essam A. Tawfik
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 18, pp. 10139-10139
Open Access | Times Cited: 6
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