OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Multiplexed imaging of high-density libraries of RNAs with MERFISH and expansion microscopy
Guiping Wang, Jeffrey R. Moffitt, Xiaowei Zhuang
Scientific Reports (2018) Vol. 8, Iss. 1
Open Access | Times Cited: 226

Showing 1-25 of 226 citing articles:

Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression
Christoph Hafemeister, Rahul Satija
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 3512

RNA sequencing: the teenage years
Rory Stark, Marta Grzelak, James Hadfield
Nature Reviews Genetics (2019) Vol. 20, Iss. 11, pp. 631-656
Closed Access | Times Cited: 1586

Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+
Chee-Huat Linus Eng, Michael J. Lawson, Qian Zhu, et al.
Nature (2019) Vol. 568, Iss. 7751, pp. 235-239
Open Access | Times Cited: 1388

Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region
Jeffrey R. Moffitt, Dhananjay Bambah-Mukku, Stephen W. Eichhorn, et al.
Science (2018) Vol. 362, Iss. 6416
Open Access | Times Cited: 1111

Exploring tissue architecture using spatial transcriptomics
Anjali Rao, Dalia Barkley, Gustavo S. França, et al.
Nature (2021) Vol. 596, Iss. 7871, pp. 211-220
Open Access | Times Cited: 1086

Museum of spatial transcriptomics
Lambda Moses, Lior Pachter
Nature Methods (2022) Vol. 19, Iss. 5, pp. 534-546
Open Access | Times Cited: 738

Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression
Chenglong Xia, Jean Fan, George Emanuel, et al.
Proceedings of the National Academy of Sciences (2019) Vol. 116, Iss. 39, pp. 19490-19499
Open Access | Times Cited: 639

Methods and applications for single-cell and spatial multi-omics
Katy Vandereyken, Alejandro Sifrim, Bernard Thienpont, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 494-515
Open Access | Times Cited: 626

Spatially Resolved Transcriptomes—Next Generation Tools for Tissue Exploration
Michaela Asp, Joseph Bergenstråhle, Joakim Lundeberg
BioEssays (2020) Vol. 42, Iss. 10
Open Access | Times Cited: 492

Expansion microscopy: principles and uses in biological research
Asmamaw T. Wassie, Yongxin Zhao, Edward S. Boyden
Nature Methods (2018) Vol. 16, Iss. 1, pp. 33-41
Open Access | Times Cited: 422

Spatially resolved cell atlas of the mouse primary motor cortex by MERFISH
Meng Zhang, Stephen W. Eichhorn, Brian Zingg, et al.
Nature (2021) Vol. 598, Iss. 7879, pp. 137-143
Open Access | Times Cited: 369

Molecular recording of mammalian embryogenesis
Michelle M. Chan, Zachary D. Smith, Stefanie Grosswendt, et al.
Nature (2019) Vol. 570, Iss. 7759, pp. 77-82
Open Access | Times Cited: 333

Brief update on endocytosis of nanomedicines
Siddharth Patel, Jeonghwan Kim, Marco Herrera-Barrera, et al.
Advanced Drug Delivery Reviews (2019) Vol. 144, pp. 90-111
Open Access | Times Cited: 326

Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems
Shahar Alon, Daniel Goodwin, Anubhav Sinha, et al.
Science (2021) Vol. 371, Iss. 6528
Open Access | Times Cited: 319

The emerging landscape of spatial profiling technologies
Jeffrey R. Moffitt, Emma Lundberg, Holger Heyn
Nature Reviews Genetics (2022) Vol. 23, Iss. 12, pp. 741-759
Closed Access | Times Cited: 281

The expanding vistas of spatial transcriptomics
Luyi Tian, Fei Chen, Evan Z. Macosko
Nature Biotechnology (2022) Vol. 41, Iss. 6, pp. 773-782
Closed Access | Times Cited: 273

Comprehensive integration of single cell data
Tim Stuart, Andrew Butler, Paul Hoffman, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2018)
Open Access | Times Cited: 265

The dawn of spatial omics
Dario Bressan, Giorgia Battistoni, Gregory J. Hannon
Science (2023) Vol. 381, Iss. 6657
Open Access | Times Cited: 264

Global Positioning System: Understanding Long Noncoding RNAs through Subcellular Localization
Joana Carlevaro-Fita, Rory Johnson
Molecular Cell (2019) Vol. 73, Iss. 5, pp. 869-883
Open Access | Times Cited: 263

Beyond mass spectrometry, the next step in proteomics
Winston Timp, G. Timp
Science Advances (2020) Vol. 6, Iss. 2
Open Access | Times Cited: 262

Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis
Tim Lohoff, Shila Ghazanfar, Alsu Missarova, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 1, pp. 74-85
Open Access | Times Cited: 254

Cell segmentation in imaging-based spatial transcriptomics
Viktor Petukhov, Rosalind J. Xu, Ruslan Soldatov, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 3, pp. 345-354
Closed Access | Times Cited: 235

Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH
Rongxin Fang, Chenglong Xia, Jennie Close, et al.
Science (2022) Vol. 377, Iss. 6601, pp. 56-62
Open Access | Times Cited: 207

Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression
Christoph Hafemeister, Rahul Satija
bioRxiv (Cold Spring Harbor Laboratory) (2019)
Open Access | Times Cited: 206

Spatially resolved single-cell genomics and transcriptomics by imaging
Xiaowei Zhuang
Nature Methods (2021) Vol. 18, Iss. 1, pp. 18-22
Open Access | Times Cited: 192

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