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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Improved TGIRT-seq methods for comprehensive transcriptome profiling with decreased adapter dimer formation and bias correction
Hengyi Xu, Jun Yao, Douglas C. Wu, et al.
Scientific Reports (2019) Vol. 9, Iss. 1
Open Access | Times Cited: 77

Showing 1-25 of 77 citing articles:

Functional diversity of small nucleolar RNAs
Tomaž Bratkovič, Janja Božič, Boris Rogelj
Nucleic Acids Research (2019) Vol. 48, Iss. 4, pp. 1627-1651
Open Access | Times Cited: 199
High-resolution quantitative profiling of tRNA abundance and modification status in eukaryotes by mim-tRNAseq
Andrew Behrens, Geraldine Rodschinka, Danny D. Nedialkova
Molecular Cell (2021) Vol. 81, Iss. 8, pp. 1802-1815.e7
Open Access | Times Cited: 177
Tau aggregates are RNA-protein assemblies that mislocalize multiple nuclear speckle components
Evan Lester, Felicia K. Ooi, Nadine Bakkar, et al.
Neuron (2021) Vol. 109, Iss. 10, pp. 1675-1691.e9
Open Access | Times Cited: 167
Quantitative tRNA-sequencing uncovers metazoan tissue-specific tRNA regulation
Otis Pinkard, Sean McFarland, Thomas J. Sweet, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 142
Exploring the expanding universe of small RNAs
Junchao Shi, Tong Zhou, Qi Chen
Nature Cell Biology (2022) Vol. 24, Iss. 4, pp. 415-423
Open Access | Times Cited: 130
TRMT6/61A-dependent base methylation of tRNA-derived fragments regulates gene-silencing activity and the unfolded protein response in bladder cancer
Zhangli Su, Ida Monshaugen, Briana Wilson, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 83
Improved Bacterial Single-Cell RNA-Seq through Automated MATQ-Seq and Cas9-Based Removal of rRNA Reads
Christina Homberger, Regan J. Hayward, Lars Barquist, et al.
mBio (2023) Vol. 14, Iss. 2
Open Access | Times Cited: 45
tRNA renovatio: Rebirth through fragmentation
Bernhard Kuhle, Qi Chen, Paul Schimmel
Molecular Cell (2023) Vol. 83, Iss. 22, pp. 3953-3971
Open Access | Times Cited: 44
Quantitative mapping of the cellular small RNA landscape with AQRNA-seq
Jennifer Hu, Daniel Yim, Duanduan Ma, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 8, pp. 978-988
Open Access | Times Cited: 59
Artifacts and biases of the reverse transcription reaction in RNA sequencing
Jasper Verwilt, Pieter Mestdagh, Jo Vandesompele
RNA (2023) Vol. 29, Iss. 7, pp. 889-897
Open Access | Times Cited: 39
Emerging functional principles of tRNA-derived small RNAs and other regulatory small RNAs
Qi Chen, Tong Zhou
Journal of Biological Chemistry (2023) Vol. 299, Iss. 10, pp. 105225-105225
Open Access | Times Cited: 26
The tRNA Val half: A strong endogenous Toll-like receptor 7 ligand with a 5′-terminal universal sequence signature
Kamlesh Pawar, Takuya Kawamura, Yohei Kirino
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 19
Open Access | Times Cited: 9
Rapid folding of nascent RNA regulates eukaryotic RNA biogenesis
Leonard Schärfen, Isaac W. Vock, Matthew D. Simon, et al.
Molecular Cell (2025)
Closed Access | Times Cited: 1
Processing by RNase 1 forms tRNA halves and distinct Y RNA fragments in the extracellular environment
Gal Nechooshtan, Dinar Yunusov, Kenneth Chang, et al.
Nucleic Acids Research (2020) Vol. 48, Iss. 14, pp. 8035-8049
Open Access | Times Cited: 59
Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase
Heather E. Upton, Lucas Ferguson, Morayma M. Temoche-Diaz, et al.
Proceedings of the National Academy of Sciences (2021) Vol. 118, Iss. 42
Open Access | Times Cited: 51
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, et al.
Nature Methods (2022) Vol. 20, Iss. 1, pp. 75-85
Open Access | Times Cited: 37
Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2
Haissi Cui, Jolene K. Diedrich, Douglas C. Wu, et al.
Nature Cell Biology (2023) Vol. 25, Iss. 4, pp. 592-603
Closed Access | Times Cited: 22
Intronic small nucleolar RNAs regulate host gene splicing through base pairing with their adjacent intronic sequences
Danny Bergeron, Laurence Faucher‐Giguère, Ann‐Kathrin Emmerichs, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 19
A ligation-independent sequencing method reveals tRNA-derived RNAs with blocked 3′ termini
Alessandro Scacchetti, Emily J. Shields, Natalie A. Trigg, et al.
Molecular Cell (2024) Vol. 84, Iss. 19, pp. 3843-3859.e8
Open Access | Times Cited: 5
Senataxin deficiency disrupts proteostasis through nucleolar ncRNA-driven protein aggregation
Xuemei Wen, Hengyi Xu, Phillip R. Woolley, et al.
The Journal of Cell Biology (2024) Vol. 223, Iss. 7
Open Access | Times Cited: 4
All the sites we cannot see: Sources and mitigation of false negatives in RNA modification studies
Shalini Oberdoerffer, Wendy V. Gilbert
Nature Reviews Molecular Cell Biology (2024)
Closed Access | Times Cited: 4
Sources of non-uniform coverage in short-read RNA-Seq data
Thomas G. Brooks, Nicholas F. Lahens, Antonijo Mrčela, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
RNA methylation: A new promising biomaker in cancer liquid biopsy
Chenxin Xu, Xin Xu, Yiwen Huang, et al.
Biochimica et Biophysica Acta (BBA) - Reviews on Cancer (2025), pp. 189337-189337
Closed Access
Identification of protein-protected mRNA fragments and structured excised intron RNAs in human plasma by TGIRT-seq peak calling
Jun Yao, Douglas C. Wu, Ryan M. Nottingham, et al.
eLife (2020) Vol. 9
Open Access | Times Cited: 28
Group II intron-like reverse transcriptases function in double-strand break repair
Seung Kuk Park, Georg Mohr, Jun Yao, et al.
Cell (2022) Vol. 185, Iss. 20, pp. 3671-3688.e23
Open Access | Times Cited: 18
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