Open Access Helper

OpenAlex Citation Counts

OpenAlex Citations Logo

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Computation and visualization of cell–cell signaling topologies in single-cell systems data using Connectome
Micha Sam Brickman Raredon, Junchen Yang, James Garritano, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 90

Showing 1-25 of 90 citing articles:

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
Daniel Dimitrov, Dénes Türei, Martín Garrido‐Rodriguez, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 303
Immune dysregulation and autoreactivity correlate with disease severity in SARS-CoV-2-associated multisystem inflammatory syndrome in children
Anjali Ramaswamy, Nina N. Brodsky, Tomokazu S. Sumida, et al.
Immunity (2021) Vol. 54, Iss. 5, pp. 1083-1095.e7
Open Access | Times Cited: 223
Dexamethasone modulates immature neutrophils and interferon programming in severe COVID-19
Sarthak Sinha, Nicole L. Rosin, Rohit Arora, et al.
Nature Medicine (2021) Vol. 28, Iss. 1, pp. 201-211
Open Access | Times Cited: 196
CellChat for systematic analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Suoqin Jin, Maksim V. Plikus, Qing Nie
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 93
Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information
Zhaoyang Liu, Dongqing Sun, Chenfei Wang
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 92
Fibroblast inflammatory priming determines regenerative versus fibrotic skin repair in reindeer
Sarthak Sinha, Holly D. Sparks, Elodie Labit, et al.
Cell (2022) Vol. 185, Iss. 25, pp. 4717-4736.e25
Open Access | Times Cited: 88
CellChat for systematic analysis of cell–cell communication from single-cell transcriptomics
Suoqin Jin, Maksim V. Plikus, Qing Nie
Nature Protocols (2024)
Closed Access | Times Cited: 81
Single-cell transcriptomic and spatial landscapes of the developing human pancreas
Oladapo E. Olaniru, Ulrich D. Kadolsky, Shichina Kannambath, et al.
Cell Metabolism (2022) Vol. 35, Iss. 1, pp. 184-199.e5
Open Access | Times Cited: 75
A Review of Single-Cell RNA-Seq Annotation, Integration, and Cell–Cell Communication
Changde Cheng, Wenan Chen, Hongjian Jin, et al.
Cells (2023) Vol. 12, Iss. 15, pp. 1970-1970
Open Access | Times Cited: 65
Comparative analysis of cell–cell communication at single-cell resolution
Aaron J. Wilk, Alex K. Shalek, Susan Holmes, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 3, pp. 470-483
Open Access | Times Cited: 60
The diversification of methods for studying cell–cell interactions and communication
Erick Armingol, Hratch Baghdassarian, Nathan E. Lewis
Nature Reviews Genetics (2024) Vol. 25, Iss. 6, pp. 381-400
Closed Access | Times Cited: 52
Recent Trends and Impact of Localized Surface Plasmon Resonance (LSPR) and Surface-Enhanced Raman Spectroscopy (SERS) in Modern Analysis
Bibhu Prasad Nanda, Priyanka Rani, Priyanka Paul, et al.
Journal of Pharmaceutical Analysis (2024) Vol. 14, Iss. 11, pp. 100959-100959
Open Access | Times Cited: 36
Context-aware deconvolution of cell–cell communication with Tensor-cell2cell
Erick Armingol, Hratch Baghdassarian, Cameron Martino, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 68
Comprehensive visualization of cell–cell interactions in single-cell and spatial transcriptomics with NICHES
Micha Sam Brickman Raredon, Junchen Yang, Neeharika Kothapalli, et al.
Bioinformatics (2022) Vol. 39, Iss. 1
Open Access | Times Cited: 55
spaCI: deciphering spatial cellular communications through adaptive graph model
Ziyang Tang, Tonglin Zhang, Baijian Yang, et al.
Briefings in Bioinformatics (2022) Vol. 24, Iss. 1
Open Access | Times Cited: 52
Choroidal endothelial and macrophage gene expression in atrophic and neovascular macular degeneration
Andrew P. Voigt, Nathaniel K. Mullin, Kelly Mulfaul, et al.
Human Molecular Genetics (2022) Vol. 31, Iss. 14, pp. 2406-2423
Open Access | Times Cited: 44
Single-cell RNA-seq methods to interrogate virus-host interactions
Kalani Ratnasiri, Aaron J. Wilk, Madeline Lee, et al.
Seminars in Immunopathology (2022) Vol. 45, Iss. 1, pp. 71-89
Open Access | Times Cited: 38
The promising application of cell-cell interaction analysis in cancer from single-cell and spatial transcriptomics
Xinyi Wang, Axel A. Almet, Qing Nie
Seminars in Cancer Biology (2023) Vol. 95, pp. 42-51
Open Access | Times Cited: 34
CellDialog: A Computational Framework for Ligand-Receptor-Mediated Cell-Cell Communication Analysis
Lihong Peng, Wei Xiong, Chendi Han, et al.
IEEE Journal of Biomedical and Health Informatics (2023) Vol. 28, Iss. 1, pp. 580-591
Closed Access | Times Cited: 25
LIANA+: an all-in-one cell-cell communication framework
Daniel Dimitrov, Philipp Schäfer, Elias Farr, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 24
Targeting tumor–stromal interactions in triple-negative breast cancer using a human vascularized micro-tumor model
Stephanie J. Hachey, Christopher J. Hatch, Daniela Gaebler, et al.
Breast Cancer Research (2024) Vol. 26, Iss. 1
Open Access | Times Cited: 13
Identifying potential ligand–receptor interactions based on gradient boosted neural network and interpretable boosting machine for intercellular communication analysis
Lihong Peng, Pengfei Gao, Wei Xiong, et al.
Computers in Biology and Medicine (2024) Vol. 171, pp. 108110-108110
Closed Access | Times Cited: 12
Defining and benchmarking open problems in single-cell analysis
Malte D. Luecken, Scott Gigante, Daniel B. Burkhardt, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 9
Pancreatic organogenesis mapped through space and time
Marissa A. Scavuzzo, Wojciech J. Szlachcic, Matthew C. Hill, et al.
Experimental & Molecular Medicine (2025)
Open Access | Times Cited: 1
CellPhoneDB v5: inferring cell–cell communication from single-cell multiomics data
Kevin Troulé, Robert Petryszak, Batuhan Çakır, et al.
Nature Protocols (2025)
Open Access | Times Cited: 1
Page 1 - Next Page

Scroll to top