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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Gut mucosa dissociation protocols influence cell type proportions and single-cell gene expression levels
Werna T. Uniken Venema, Aarón D. Ramírez-Sánchez, Emilia Bigaeva, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 42

Showing 1-25 of 42 citing articles:

Bifidobacterium mechanisms of immune modulation and tolerance
Samuel J. Gavzy, Allison Kensiski, Zachariah L Lee, et al.
Gut Microbes (2023) Vol. 15, Iss. 2
Open Access | Times Cited: 75
Profiling cell identity and tissue architecture with single-cell and spatial transcriptomics
Gunsagar S. Gulati, Jeremy Philip D’Silva, Yunhe Liu, et al.
Nature Reviews Molecular Cell Biology (2024) Vol. 26, Iss. 1, pp. 11-31
Closed Access | Times Cited: 34
Rebuilding the microenvironment of primary tumors in humans: a focus on stroma
Siwon Mun, Hyun Jin Lee, Pilnam Kim
Experimental & Molecular Medicine (2024) Vol. 56, Iss. 3, pp. 527-548
Open Access | Times Cited: 12
Insights in Cellular and Molecular Signatures of the Small Intestinal Graft Posttransplantation: Successful, Recovered, and Rejected—A Case Series
Naomi Karmi, Roy Oelen, Emilia Bigaeva, et al.
Transplantation (2025)
Closed Access | Times Cited: 1
Matrix metalloproteinases in intestinal fibrosis
Carin Biel, Klaas Nico Faber, Ruud A. Bank, et al.
Journal of Crohn s and Colitis (2023) Vol. 18, Iss. 3, pp. 462-478
Open Access | Times Cited: 21
Strain-specific alterations in gut microbiome and host immune responses elicited by tolerogenic Bifidobacterium pseudolongum
Bing Ma, Samuel J. Gavzy, Vikas Saxena, et al.
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 20
Complex in vitro models positioned for impact to drug testing in pharma: a review
Michael S. Kang, Eugene C. Chen, Helen Cifuentes, et al.
Biofabrication (2024) Vol. 16, Iss. 4, pp. 042006-042006
Open Access | Times Cited: 6
High-throughput transcriptomics
Nunzio D’Agostino, Wenli Li, Dapeng Wang
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 28
Comparison of single‑nucleus and single‑cell transcriptomes in hepatocellular carcinoma tissue
Fei Wen, Xiaojie Tang, Xu Lin, et al.
Molecular Medicine Reports (2022) Vol. 26, Iss. 5
Open Access | Times Cited: 27
Human pluripotent stem cell-derived inner ear organoids recapitulate otic development in vitro
Daniela Doda, Sara Alonso Jimenez, Hubert Rehrauer, et al.
Development (2023) Vol. 150, Iss. 19
Closed Access | Times Cited: 15
FixNCut: single-cell genomics through reversible tissue fixation and dissociation
Laura Jiménez-Gracia, Doménica Marchese, Juan C. Nieto, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 6
Alveolar epithelial progenitor cells require Nkx2-1 to maintain progenitor-specific epigenomic state during lung homeostasis and regeneration
Andrea Tóth, Paranthaman S. Kannan, John Snowball, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 12
The use of single-cell RNA-seq to study heterogeneity at varying levels of virus–host interactions
Sharmada Swaminath, Alistair B. Russell
PLoS Pathogens (2024) Vol. 20, Iss. 1, pp. e1011898-e1011898
Open Access | Times Cited: 4
A contamination focused approach for optimizing the single-cell RNA-seq experiment
Deronisha Arceneaux, Zhengyi Chen, Alan J. Simmons, et al.
iScience (2023) Vol. 26, Iss. 7, pp. 107242-107242
Open Access | Times Cited: 10
Age-associated changes in lineage composition of the enteric nervous system regulate gut health and disease
Subhash Kulkarni, Monalee Saha, Jared Slosberg, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 10
Single-cell sequencing provides clues about the developmental genetic basis of evolutionary adaptations in syngnathid fishes
Hope M. Healey, Hayden B. Penn, Clayton M. Small, et al.
eLife (2025) Vol. 13
Open Access
Diving Deep: Profiling Exhausted T Cells in the Tumor Microenvironment Using Spectral Flow Cytometry
Karen Wei Weng Teng, Weng Hua Khoo, Nicholas Ching Wei Ho, et al.
Cytometry Part A (2025)
Closed Access
Protocol for the collection and analysis of the different immune cell subsets in the murine intestinal lamina propria
Arthi Shanmugavadivu, Katlynn Carter, Aysan Poursadegh Zonouzi, et al.
STAR Protocols (2024) Vol. 5, Iss. 3, pp. 103154-103154
Open Access | Times Cited: 3
Considerations for building and using integrated single-cell atlases
Karin Hrovatin, Lisa Sikkema, Vladimir A. Shitov, et al.
Nature Methods (2024)
Closed Access | Times Cited: 3
Age-associated changes in lineage composition of the enteric nervous system regulate gut health and disease
Subhash Kulkarni, Monalee Saha, Jared Slosberg, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 8
Optimization of Tissue Digestion Methods for Characterization of Photoaged Skin by Single Cell RNA Sequencing Reveals Preferential Enrichment of T Cell Subsets
Terri Clister, Rosalyn M. Fey, Zachary R. Garrison, et al.
Cells (2024) Vol. 13, Iss. 3, pp. 266-266
Open Access | Times Cited: 2
Identification of New Markers of Angiogenic Sprouting Using Transcriptomics: New Role for RND3
Colette A. Abbey, Camille L. Duran, Zhishi Chen, et al.
Arteriosclerosis Thrombosis and Vascular Biology (2024) Vol. 44, Iss. 5
Open Access | Times Cited: 2
Single-cell RNA sequencing reveals dysregulated cellular programmes in the inflamed epithelium of Crohn’s disease patients
Monika Krzak, T Alegbe, D. Leland Taylor, et al.
medRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 5
Spatial transcriptomics add a new dimension to our understanding of the gut
Charles Danan, Kay Katada, Louis R. Parham, et al.
AJP Gastrointestinal and Liver Physiology (2022) Vol. 324, Iss. 2, pp. G91-G98
Open Access | Times Cited: 9
FixNCut: Single-cell genomics through reversible tissue fixation and dissociation
Laura Jiménez-Gracia, Doménica Marchese, Juan C. Nieto, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
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