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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Template switching and duplications in SARS-CoV-2 genomes give rise to insertion variants that merit monitoring
Sofya K. Garushyants, Igor B. Rogozin, Eugene V. Koonin
Communications Biology (2021) Vol. 4, Iss. 1
Open Access | Times Cited: 40

Showing 1-25 of 40 citing articles:

The Remarkable Evolutionary Plasticity of Coronaviruses by Mutation and Recombination: Insights for the COVID-19 Pandemic and the Future Evolutionary Paths of SARS-CoV-2
Grigoris D. Amoutzias, Marios Nikolaidis, Eleni Tryfonopoulou, et al.
Viruses (2022) Vol. 14, Iss. 1, pp. 78-78
Open Access | Times Cited: 82
Omicron variant of SARS-CoV-2 harbors a unique insertion mutation of putative viral or human genomic origin
AJ Venkatakrishnan, Praveen Anand, Patrick J. Lenehan, et al.
(2021)
Open Access | Times Cited: 64
Epistasis at the SARS-CoV-2 Receptor-Binding Domain Interface and the Propitiously Boring Implications for Vaccine Escape
Nash D. Rochman, Guilhem Faure, Yuri I. Wolf, et al.
mBio (2022) Vol. 13, Iss. 2
Open Access | Times Cited: 52
Emergence of a recurrent insertion in the N-terminal domain of the SARS-CoV-2 spike glycoprotein
Marco Gerdol, Klevia Dishnica, Alejandro Giorgetti
Virus Research (2022) Vol. 310, pp. 198674-198674
Open Access | Times Cited: 48
The origins of COVID‐19 pandemic: A brief overview
Ying‐Jian Hao, Yulan Wang, Mei‐Yue Wang, et al.
Transboundary and Emerging Diseases (2022) Vol. 69, Iss. 6, pp. 3181-3197
Open Access | Times Cited: 41
Comparative Analysis of SARS-CoV-2 Variants of Concern, Including Omicron, Highlights Their Common and Distinctive Amino Acid Substitution Patterns, Especially at the Spike ORF
Marios Nikolaidis, Athanasios Papakyriakou, Katerina Chlichlia, et al.
Viruses (2022) Vol. 14, Iss. 4, pp. 707-707
Open Access | Times Cited: 40
The Mutational Landscape of SARS-CoV-2
Bryan Saldivar‐Espinoza, Pol Garcia‐Segura, Nil Novau-Ferré, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 10, pp. 9072-9072
Open Access | Times Cited: 31
Targeted accurate RNA consensus sequencing (tARC-seq) reveals mechanisms of replication error affecting SARS-CoV-2 divergence
Catherine C. Bradley, Chen Wang, Alasdair J.E. Gordon, et al.
Nature Microbiology (2024) Vol. 9, Iss. 5, pp. 1382-1392
Open Access | Times Cited: 11
matOptimize: a parallel tree optimization method enables online phylogenetics for SARS-CoV-2
Cheng Ye, Bryan Thornlow, Angie S. Hinrichs, et al.
Bioinformatics (2022) Vol. 38, Iss. 15, pp. 3734-3740
Open Access | Times Cited: 27
Molecular adaptations during viral epidemics
Nash D. Rochman, Yuri I. Wolf, Eugene V. Koonin
EMBO Reports (2022) Vol. 23, Iss. 8
Open Access | Times Cited: 26
Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
Elizabeth Jaworski, Rose M. Langsjoen, Brooke Mitchell, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 29
Evolutionary tinkering enriches the hierarchical and nested structures in amino acid sequences
Zecheng Zhang, Chunxiuzi Liu, Yingjun Zhu, et al.
Physical Review Research (2024) Vol. 6, Iss. 2
Open Access | Times Cited: 4
On the Origins of Omicron’s Unique Spike Gene Insertion
AJ Venkatakrishnan, Praveen Anand, Patrick J. Lenehan, et al.
Vaccines (2022) Vol. 10, Iss. 9, pp. 1509-1509
Open Access | Times Cited: 18
A novel genotyping system based on site polymorphism on spike gene reveals the evolutionary pathway of porcine epidemic diarrhea virus
M.K. Lei, Huimin Li, Xiaoyu Chen, et al.
iMetaOmics. (2025)
Open Access
A Model of Non-Homologous Recombination Mediated by HIV-1 Reverse Transcriptase Explaining Sequence Motif Duplications That Confer a Replication Fitness Advantage
Arun Panchapakesan, Udaykumar Ranga
Viruses (2025) Vol. 17, Iss. 5, pp. 680-680
Open Access
Correlated substitutions reveal SARS-like coronaviruses recombine frequently with a diverse set of structured gene pools
Asher Preska Steinberg, Olin Silander, Edo Kussell
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 5
Open Access | Times Cited: 9
Spatiotemporal genome diversity of SARS-CoV-2 in wastewater: a two-year global epidemiological study
Manisha Mandal, Shyamapada Mandal
Environmental Monitoring and Assessment (2023) Vol. 196, Iss. 1
Closed Access | Times Cited: 9
Properties and Mechanisms of Deletions, Insertions, and Substitutions in the Evolutionary History of SARS-CoV-2
Igor B. Rogozin, Andreu Saura, Eugenia Poliakov, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 7, pp. 3696-3696
Open Access | Times Cited: 3
Deletions across the SARS-CoV-2 Genome: Molecular Mechanisms and Putative Functional Consequences of Deletions in Accessory Genes
Igor B. Rogozin, Andreu Saura, Anastassia Bykova, et al.
Microorganisms (2023) Vol. 11, Iss. 1, pp. 229-229
Open Access | Times Cited: 7
MSH3 Homology and Potential Recombination Link to SARS-CoV-2 Furin Cleavage Site
Balamurali K. Ambati, Akhil Varshney, Kenneth Lundström, et al.
Frontiers in Virology (2022) Vol. 2
Open Access | Times Cited: 12
Genomic Analysis of SARS-CoV-2 Alpha, Beta and Delta Variants of Concern Uncovers Signatures of Neutral and Non-Neutral Evolution
Monika Kurpas, Roman Jaksik, Paweł Kuś, et al.
Viruses (2022) Vol. 14, Iss. 11, pp. 2375-2375
Open Access | Times Cited: 10
CoVigator—A Knowledge Base for Navigating SARS-CoV-2 Genomic Variants
Thomas Bukur, Pablo Riesgo-Ferreiro, Patrick Sorn, et al.
Viruses (2023) Vol. 15, Iss. 6, pp. 1391-1391
Open Access | Times Cited: 4
Evolutionary Tinkering Enriches the Hierarchical and Nested Structures in Amino Acid Sequences
Zecheng Zhang, Chunxiuzi Liu, Yingjun Zhu, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 1
Epistasis at the SARS-CoV-2 RBD Interface and the Propitiously Boring Implications for Vaccine Escape
Nash D. Rochman, Guilhem Faure, Yuri I. Wolf, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 10
Detection of the Omicron SARS-CoV-2 Lineage and Its BA.1 Variant with Multiplex RT-qPCR
Nikita Yolshin, Andrey B. Komissarov, K.V. Varchenko, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 24, pp. 16153-16153
Open Access | Times Cited: 6
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