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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Database-independent molecular formula annotation using Gibbs sampling through ZODIAC
Marcus Ludwig, Louis‐Félix Nothias, Kai Dührkop, et al.
Nature Machine Intelligence (2020) Vol. 2, Iss. 10, pp. 629-641
Open Access | Times Cited: 168

Showing 1-25 of 168 citing articles:

Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra
Kai Dührkop, Louis‐Félix Nothias, Markus Fleischauer, et al.
Nature Biotechnology (2020) Vol. 39, Iss. 4, pp. 462-471
Open Access | Times Cited: 564
Mass spectrometry-based metabolomics in microbiome investigations
Anelize Bauermeister, Helena Mannochio-Russo, Letícia V. Costa‐Lotufo, et al.
Nature Reviews Microbiology (2021) Vol. 20, Iss. 3, pp. 143-160
Open Access | Times Cited: 319
High-confidence structural annotation of metabolites absent from spectral libraries
Martin Hoffmann, Louis‐Félix Nothias, Marcus Ludwig, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 3, pp. 411-421
Open Access | Times Cited: 188
Metabolite discovery through global annotation of untargeted metabolomics data
Li Chen, Wenyun Lu, Lin Wang, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1377-1385
Open Access | Times Cited: 173
Artificial intelligence for natural product drug discovery
Michael W. Mullowney, Katherine Duncan, Somayah S. Elsayed, et al.
Nature Reviews Drug Discovery (2023) Vol. 22, Iss. 11, pp. 895-916
Closed Access | Times Cited: 155
Metabolite annotation from knowns to unknowns through knowledge-guided multi-layer metabolic networking
Zhiwei Zhou, Mingdu Luo, Haosong Zhang, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 140
Advances in decomposing complex metabolite mixtures using substructure- and network-based computational metabolomics approaches
Mehdi A. Beniddir, Kyo Bin Kang, Grégory Genta‐Jouve, et al.
Natural Product Reports (2021) Vol. 38, Iss. 11, pp. 1967-1993
Open Access | Times Cited: 131
MSNovelist: de novo structure generation from mass spectra
Michael A. Stravs, Kai Dührkop, Sebastian Böcker, et al.
Nature Methods (2022) Vol. 19, Iss. 7, pp. 865-870
Open Access | Times Cited: 115
Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity
Justin P. Shaffer, Louis‐Félix Nothias, Luke Thompson, et al.
Nature Microbiology (2022) Vol. 7, Iss. 12, pp. 2128-2150
Open Access | Times Cited: 110
NORMAN guidance on suspect and non-target screening in environmental monitoring
Juliane Hollender, Emma Schymanski, Lutz Ahrens, et al.
Environmental Sciences Europe (2023) Vol. 35, Iss. 1
Open Access | Times Cited: 103
The underappreciated diversity of bile acid modifications
Ipsita Mohanty, Helena Mannochio-Russo, Joshua V. Schweer, et al.
Cell (2024) Vol. 187, Iss. 7, pp. 1801-1818.e20
Open Access | Times Cited: 64
A conserved interdomain microbial network underpins cadaver decomposition despite environmental variables
Zachary M. Burcham, Aeriel D. Belk, Bridget McGivern, et al.
Nature Microbiology (2024) Vol. 9, Iss. 3, pp. 595-613
Open Access | Times Cited: 23
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree
Anupriya Tripathi, Yoshiki Vázquez‐Baeza, Julia M. Gauglitz, et al.
Nature Chemical Biology (2020) Vol. 17, Iss. 2, pp. 146-151
Open Access | Times Cited: 94
Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals
Linda Wegley Kelly, Craig E. Nelson, Daniel Petras, et al.
Proceedings of the National Academy of Sciences (2022) Vol. 119, Iss. 5
Open Access | Times Cited: 61
The year 2020 in natural product bioinformatics: an overview of the latest tools and databases
Marnix H. Medema
Natural Product Reports (2021) Vol. 38, Iss. 2, pp. 301-306
Open Access | Times Cited: 58
Good practices and recommendations for using and benchmarking computational metabolomics metabolite annotation tools
Niek De Jonge, Kevin Mildau, David Meijer, et al.
Metabolomics (2022) Vol. 18, Iss. 12
Open Access | Times Cited: 56
Advanced analytical and informatic strategies for metabolite annotation in untargeted metabolomics
Yuping Cai, Zhiwei Zhou, Zheng‐Jiang Zhu
TrAC Trends in Analytical Chemistry (2022) Vol. 158, pp. 116903-116903
Closed Access | Times Cited: 54
BUDDY: molecular formula discovery via bottom-up MS/MS interrogation
Shipei Xing, Sam Shen, Banghua Xu, et al.
Nature Methods (2023) Vol. 20, Iss. 6, pp. 881-890
Open Access | Times Cited: 38
Evaluation of Data-Dependent MS/MS Acquisition Parameters for Non-Targeted Metabolomics and Molecular Networking of Environmental Samples: Focus on the Q Exactive Platform
Paolo Stincone, Abzer Kelminal Pakkir Mohamed Shah, Robin Schmid, et al.
Analytical Chemistry (2023) Vol. 95, Iss. 34, pp. 12673-12682
Open Access | Times Cited: 37
Annotating metabolite mass spectra with domain-inspired chemical formula transformers
Samuel Goldman, Jeremy Wohlwend, Martin Stražar, et al.
Nature Machine Intelligence (2023) Vol. 5, Iss. 9, pp. 965-979
Open Access | Times Cited: 30
A Sample-Centric and Knowledge-Driven Computational Framework for Natural Products Drug Discovery
Arnaud Gaudry, Marco Pagni, Florence Mehl, et al.
ACS Central Science (2024) Vol. 10, Iss. 3, pp. 494-510
Open Access | Times Cited: 9
Machine learning–enhanced molecular network reveals global exposure to hundreds of unknown PFAS
X. Y. Wang, Nanyang Yu, Zhaoyu Jiao, et al.
Science Advances (2024) Vol. 10, Iss. 21
Open Access | Times Cited: 9
A scaffold protein manages the biosynthesis of steroidal defense metabolites in plants
Marianna Boccia, Danny Kessler, Wibke Seibt, et al.
Science (2024)
Closed Access | Times Cited: 9
Invasive macroalgae shape chemical and microbial waterscapes on coral reefs
Chloé Pozas-Schacre, Hugo Bischoff, Delphine Raviglione, et al.
Communications Biology (2025) Vol. 8, Iss. 1
Open Access | Times Cited: 1
Artificial Intelligence in Natural Product Drug Discovery: Current Applications and Future Perspectives
Amit Gangwal, Antonio Lavecchia
Journal of Medicinal Chemistry (2025)
Open Access | Times Cited: 1
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