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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Assessing the performance of MM/PBSA and MM/GBSA methods. 9. Prediction reliability of binding affinities and binding poses for protein–peptide complexes
Gaoqi Weng, Ercheng Wang, Fu Chen, et al.
Physical Chemistry Chemical Physics (2019) Vol. 21, Iss. 19, pp. 10135-10145
Closed Access | Times Cited: 124

Showing 1-25 of 124 citing articles:

Fast Identification of Possible Drug Treatment of Coronavirus Disease-19 (COVID-19) through Computational Drug Repurposing Study
Junmei Wang
Journal of Chemical Information and Modeling (2020) Vol. 60, Iss. 6, pp. 3277-3286
Open Access | Times Cited: 471
Dielectric continuum methods for quantum chemistry
John M. Herbert
Wiley Interdisciplinary Reviews Computational Molecular Science (2021) Vol. 11, Iss. 4
Open Access | Times Cited: 164
Identifying Inhibitor-SARS-CoV2-3CLpro Binding Mechanism Through Molecular Docking, GaMD Simulations, Correlation Network Analysis and MM-GBSA Calculations
Jianzhong Chen, Jian Wang, Wanchun Yang, et al.
Molecules (2025) Vol. 30, Iss. 4, pp. 805-805
Open Access | Times Cited: 4
Integrated unsupervised–supervised modeling and prediction of protein–peptide affinities at structural level
Peng Zhou, Wen Li, Jing Lin, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 3
Closed Access | Times Cited: 51
Deep learning for advancing peptide drug development: Tools and methods in structure prediction and design
Xinyi Wu, Huitian Lin, Renren Bai, et al.
European Journal of Medicinal Chemistry (2024) Vol. 268, pp. 116262-116262
Closed Access | Times Cited: 13
Assessing the performance of MM/PBSA and MM/GBSA methods. 10. Prediction reliability of binding affinities and binding poses for RNA–ligand complexes
Dejun Jiang, Hongyan Du, Huifeng Zhao, et al.
Physical Chemistry Chemical Physics (2024) Vol. 26, Iss. 13, pp. 10323-10335
Closed Access | Times Cited: 10
Fast Identification of Possible Drug Treatment of Coronavirus Disease -19 (COVID-19) Through Computational Drug Repurposing Study
Junmei Wang
(2020)
Open Access | Times Cited: 60
Bioinformatics and Biosimulations as Toolbox for Peptides and Peptidomimetics Design: Where Are We?
Ilda D’Annessa, Francesco Saverio Di Leva, Anna La Teana, et al.
Frontiers in Molecular Biosciences (2020) Vol. 7
Open Access | Times Cited: 46
Fast Identification of Possible Drug Treatment of Coronavirus Disease -19 (COVID-19) Through Computational Drug Repurposing Study
Junmei Wang
(2020)
Open Access | Times Cited: 45
Improving Protein–Peptide Docking Results via Pose-Clustering and Rescoring with a Combined Knowledge-Based and MM–GBSA Scoring Function
Huanyu Tao, Yanjun Zhang, Sheng‐You Huang
Journal of Chemical Information and Modeling (2020) Vol. 60, Iss. 4, pp. 2377-2387
Closed Access | Times Cited: 40
Fast Prediction of Binding Affinities of the SARS-CoV-2 Spike Protein Mutant N501Y (UK Variant) with ACE2 and Miniprotein Drug Candidates
Alexander H. Williams, Chang‐Guo Zhan
The Journal of Physical Chemistry B (2021) Vol. 125, Iss. 17, pp. 4330-4336
Open Access | Times Cited: 33
Predicting the mutation effects of protein–ligand interactions via end-point binding free energy calculations: strategies and analyses
Yang Yu, Zhe Wang, Lingling Wang, et al.
Journal of Cheminformatics (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 26
Modelling peptide–protein complexes: docking, simulations and machine learning
Arup Mondal, Liwei Chang, Alberto Pérez
QRB Discovery (2022) Vol. 3
Open Access | Times Cited: 25
Rational Prediction of PROTAC-Compatible Protein–Protein Interfaces by Molecular Docking
Gilberto P. Pereira, Brian Jiménez‐García, Riccardo Pellarin, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 21, pp. 6823-6833
Open Access | Times Cited: 15
The XBB.1.5 slightly increase the binding affinity for host receptor ACE2 and exhibit strongest immune escaping features: molecular modeling and free energy calculation
Muhammad Suleman, Aneela Murtaza, Haji Muhammad Shoaib Khan, et al.
Frontiers in Molecular Biosciences (2023) Vol. 10
Open Access | Times Cited: 13
Uncovering the Kinetic Characteristics and Degradation Preference of PROTAC Systems with Advanced Theoretical Analyses
Rongfan Tang, Zhe Wang, Sutong Xiang, et al.
JACS Au (2023) Vol. 3, Iss. 6, pp. 1775-1789
Open Access | Times Cited: 11
Multi-epitope peptide vaccines targeting dengue virus serotype 2 created via immunoinformatic analysis
Radwa N. Morgan, Nasser S. M. Ismail, Mohammad Y. Alshahrani, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 4
Accurate Characterization of the Allosteric Energy Landscapes, Binding Hotspots and Long-Range Communications for KRAS Complexes with Effector Proteins : Integrative Approach Using Microsecond Molecular Dynamics, Deep Mutational Scanning of Binding Energetics and Allosteric Network Modeling
Sian Xiao, Mohammed Merae Alshahrani, Guang Hu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
Comprehensive Evaluation of End-Point Free Energy Methods in DNA–Ligand Interaction Predictions
Cuiyu Li, Hongyan Du, Chengwei Zhang, et al.
Journal of Chemical Information and Modeling (2025)
Closed Access
Elucidating the suppressive mechanism of four inhibitors on VP39 and unique conformational changes with protein in mode 2
Pengfei Gao, Song Luo, Jinxin Liu, et al.
Spectrochimica Acta Part A Molecular and Biomolecular Spectroscopy (2025) Vol. 334, pp. 125917-125917
Closed Access
Molecular Insights into the Rhamnolipid-Promoted Enzymatic Performance on Removing Phenolic Pollutants
Zhuanglin Shen, Jinyan Zeng, Jiaqing Cui, et al.
Langmuir (2025)
Closed Access
Computational Insights Into the Inhibition of Novel Imidazole [1,2‐α] Pyrimidine Derivatives Against Influenza A Virus
Rong Liu, Hongping Wan, Liang Zou, et al.
ChemistrySelect (2025) Vol. 10, Iss. 9
Closed Access
Atomistic Profiling of KRAS Interactions with Monobodies and Affimer Proteins Through Ensemble-Based Mutational Scanning Unveils Conserved Residue Networks Linking Cryptic Pockets and Regulating Mechanisms of Binding, Specificity and Allostery
Mohammed Alshahrani, Vedant Parikh, Brian Foley, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
Controlled release of dasatinib from cyclodextrin-based inclusion complexes by mechanochemistry: A computational and experimental study
Katarina Sokač, Lucija Vrban, Marin Liović, et al.
International Journal of Pharmaceutics (2025), pp. 125552-125552
Closed Access
Alginate-pectin microparticles embedding self-assembling antimicrobial peptides and resveratrol for antimicrobial and anti-inflammatory applications
Cesar Augusto Roque‐Borda, Marco Roberto Chávez-Morán, Laura Maria Duran Gleriani Primo, et al.
Food Hydrocolloids (2025), pp. 111454-111454
Open Access
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